YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG8083-PC, CG8083-PA
Organism: Drosophila melanogaster
Length: 603 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8083-PC, CG8083-PA.

Description E-value Query
Range
Subject
Range
CG8083-PB - This gene is referred to in FlyBase by the symbol Dmel\CG8083 (CG8083, FBgn0025709). It is a protein...
688.0 [0..1] [603..1]

Back

Predicted Domain #1
Region A:
Residues: [1-173]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAESSKGAI NNGYELDHKE LDIRDSEEFT EHPLDDTSEV ANKKGYFEKN PKVARLVRIS  60
   61 IYVLLHLCVV GYFSYATYHY HDITNYECYW KDNPLCGINF CTGYGMLLLL LGFIYLGLFY 120
  121 YYVFKPMVGH SLHRNYIKPF SKKWHNFSRT RVVSLASIAL LLALLAIFVY FEC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [174-260]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RDETQKLVSL VAPCFFILCG YVFSTNRRAI NWRIVITGIT CQFLLGIFCI RWEVGRKIFE  60
   61 CLGNKVATFL GYATDGAEFV FGDFLVN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 28.443697
Match: PF01773.11
Description: No description for PF01773.11 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [261-433]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NNVFAFAILP VIFFFSFFIS ILYYMGTMQW VVIKLGWILQ QILGTTVCES VTAAANIFLG  60
   61 MSESPLLIRP YINKLTKSEI HSIMVSGFAT VSGTVLAAYL SFGASAAHLI TSSVMAAPAT 120
  121 LAISKLYMPE TEESQTSSDS IELEKSQDSS LLDAASSGAS NAVPIVLGII ANI

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 14.886057
Match: PF07670.5
Description: No description for PF07670.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [434-603]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VAFVAFIAFL NGLVSWFGYL VGLEQIDFEW IFSKLFIPLV WAMGVPKEDC DIIAKVVATK  60
   61 TIINEFVAYE RLGQYIENND ITARSAGIAT FAICGFANPS SLGILIGSLS AMAPHRRSTI 120
  121 TAVAFRAFVV GSIVCFVSAS FAGILIQEDD ERANYNRIFE KLGRKNVTQF 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle