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View Structure Prediction Details

Protein: Lcp2-PA, FBpp0305734
Organism: Drosophila melanogaster
Length: 126 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Lcp2-PA, FBpp0305734.

Description E-value Query
Range
Subject
Range
gi|108875723, gi... - gi|157118418|ref|XP_001659105.1| Pupal cuticle protein, putative [Aedes aegypti], gi|108875723|gb|EA...
141.0 [0..1] [121..1]
Lcp1-PA, FBpp0305735 - The gene Larval cuticle protein 1 is referred to in FlyBase by the symbol Dmel\Lcp1 (CG11650, FBgn00...
gi|220951974 - gi|220951974|gb|ACL88530.1| Lcp1-PA [synthetic construct]
140.0 [0..1] [126..1]
gi|91083823 - gi|91083823|ref|XP_973633.1| PREDICTED: similar to Cuticular protein 65Az CG12330-PA [Tribolium cast...
132.0 [0..3] [124..244]
gi|118787584, gi... - gi|118787584|ref|XP_316152.3| ENSANGP00000019740 [Anopheles gambiae str. PEST], gi|116126872|gb|EAA1...
130.0 [0..1] [120..1]

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Predicted Domain #1
Region A:
Residues: [1-126]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKFVMILAV VGVATALAPV SRSDDVHADV LSRSDDVRAD GFDSSLHTSN GIEQAASGDA  60
   61 HGNIHGNFGW ISPEGEHVEV KYVANENGYQ PSGAWIPTPP PIPEAIARAV AWLESHPPAP 120
  121 EHPRHH

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 23.376751
Match: PF00379.14
Description: No description for PF00379.14 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.824 N/A N/A d.105.1 Clathrin adaptor appendage, alpha and beta chain-specific domain
View Download 0.821 N/A N/A d.105.1 Clathrin adaptor appendage, alpha and beta chain-specific domain
View Download 0.799 N/A N/A d.105.1 Clathrin adaptor appendage, alpha and beta chain-specific domain
View Download 0.766 N/A N/A b.60.1 Lipocalins
View Download 0.742 N/A N/A d.105.1 Clathrin adaptor appendage, alpha and beta chain-specific domain
View Download 0.731 N/A N/A b.60.1 Lipocalins
View Download 0.726 N/A N/A d.24.1 Pili subunits
View Download 0.706 N/A N/A d.24.1 Pili subunits
View Download 0.676 N/A N/A d.105.1 Clathrin adaptor appendage, alpha and beta chain-specific domain


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