YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG2183-PA
Organism: Drosophila melanogaster
Length: 461 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG2183-PA.

Description E-value Query
Range
Subject
Range
gi|115951930 - gi|115951930|ref|XP_001184056.1| PREDICTED: similar to ankyrin 2,3/unc44 [Strongylocentrotus purpura...
561.0 [0..1] [460..332]

Back

Predicted Domain #1
Region A:
Residues: [1-64]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSNLCKYGP PPDSDSDSSY DGFYFSDKVK RSKPAPYVDP EQKLYDAVVA GDLKTMQEEM  60
   61 RKLV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.221849
Match: 2f8xK
Description: No description for 2f8xK was found.

Predicted Domain #2
Region A:
Residues: [65-461]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LQVDQPVKGG LNLLMLACRE GHYKIVEWLL ERAGANVNRQ LDSLMPLMMA CNTTHKDPCL  60
   61 AERIVGLLLR HGAVINVSEK YGMTPFMFAC QNGFAGVVRL LIKDASFDAV DNQGCTAIFH 120
  121 AIEKNHVEVV KLLVEAGANA TIANNKGYTP TQVAECHGYY DLLEILPRPA STYLVPTHFL 180
  181 GYNTLRDHIP RIFLKSDCPE YFQELNGILE AINIGNMVQY FAIARISLAD FLVMDEQSLR 240
  241 EIGIEYPIFR HKILTGILDF HLHHWSNSSI ARVKKDEMNN FYEILLITAS HLQHLVIIQA 300
  301 SLRFILKNQE HNKMGQPSEM QVAAMKSNLQ GYRDVLNQIT KTVKYLGSFS PSQNPLFIDF 360
  361 NEILAERKRK KVRSYFKYTT IILGISVFIC LKCKWFS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 95.522879
Match: 1n11A
Description: Ankyrin-R
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
protein binding 0.677887837300398 bayes_pls_golite062009
binding 0.6767002227622 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle