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View Structure Prediction Details

Protein: CG2158-PA
Organism: Drosophila melanogaster
Length: 564 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG2158-PA.

Description E-value Query
Range
Subject
Range
gi|114579433 - gi|114579433|ref|XP_001136949.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
235.0 [0..147] [564..757]

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Predicted Domain #1
Region A:
Residues: [1-70]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGKRQATSN LNHENWDLEE EPEERGTFRT ATEEELKTRV IKKARRKIAG GSSAAEEDGA  60
   61 EEKTAEPKSV 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.07
Match: 1b6aA
Description: HUMAN METHIONINE AMINOPEPTIDASE 2 COMPLEXED WITH TNP-470
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [71-259]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FSGFSGFGKP AASPAAGSPF SFLANVTAPA TTSSSEPKKS AFSFGFSSSS SSADRPVSTS  60
   61 ICGTASTSST APSPLPAKES TSTVDGAKPT TSIFGNISAA KKESSEAKTS SSSTSLTSTM 120
  121 ETSEYRESVA DLNRSVIKFL QDQMGKSPYC ILTPVFKNYD EHLKDLQDEE SARTNSTKSK 180
  181 TAQARSQEP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [260-452]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VAKVSRASSP PKAATTFTFG KPSAPIGASV SPLAKKPNCT ITSGGTTTTT ATPLVSFGST  60
   61 ASFTAPVPSS SSIFSLTAKP TGEAKSDDTP KSSIFSFGAK DTTTKKDEPN FSAPKTNGFS 120
  121 FGLKSNNDDK PSTSLFAGFG KAPGGAGDGA KGFSFTNSAT PFSLGNIHPP AAAAAPAEEE 180
  181 KEEDTPPKVE FKQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [453-564]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VVEDDAIYSK RCKVFIKKDK DFGDRGVGTL YLKPVKDSEK IQLLVRADTN LGNILVNLIL  60
   61 SKGIPCQRMG KNNVLMVCVP TPEDSKATSL LLRVKTGDEA DDLLEKIKEH IK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.69897
Match: 2ec1A
Description: No description for 2ec1A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle