| Protein: | CG8713-PA |
| Organism: | Drosophila melanogaster |
| Length: | 395 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8713-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
177.0 | [0..8] | [249..60] |
|
Region A: Residues: [1-78] |
1 11 21 31 41 51
| | | | | |
1 MSSRRSSFRR REKPAFERFK DHCRHFTAFM FSNVGIILLV TFYIIGGAFI FQSIEIFEYE 60
61 RLKSEKPHRF IARNFSGE
|
| Detection Method: |  |
| Confidence: | 37.522879 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [79-327] |
1 11 21 31 41 51
| | | | | |
1 CLSRIWELTA ENISFFDHHA YRRRVNDVLL DYQRAIVKKQ LKGPDVEQWS FSGAFLYSLT 60
61 VITTIGYGNI TPHSECGKLV TILYAIIGMP LFLLYLSNIG DVLAKSFKWI YSKVCLCRIC 120
121 PGVAKRRIIR ERRKMRQLAR ALQMHDMENA RGSSSYTSTS STTSSNSSSS EYTRSSRQSS 180
181 SLVDIQYTES DSDIEREIRG STDEITVPVT VCVFVMVGYI LWGALLFGRW EDWNYLDGSY 240
241 FCLISLSSI
|
| Detection Method: | |
| Confidence: | 7.221849 |
| Match: | 1p7bA |
| Description: | Inward rectifier potassium channel Kirbac1.1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [328-395] |
1 11 21 31 41 51
| | | | | |
1 GFGDLVPGDR VITADRDKVE VSFILCAIYL LLGMAVIAMC FNLMQEQVVH NIRAIKRGFK 60
61 ACFRCRTS
|
| Detection Method: | |
| Confidence: | 3.38 |
| Match: | 2qksA |
| Description: | No description for 2qksA was found. |
