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View Structure Prediction Details

Protein: Nup44A-PC, Nup44...
Organism: Drosophila melanogaster
Length: 354 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Nup44A-PC, Nup44....

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
350.0 [0..1] [354..1366]

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Predicted Domain #1
Region A:
Residues: [1-354]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDVEPIIAD HKDVIHDVVF DYYGRRMATC SSDQTVKIWD EDGQGKWNVT SSWKAHSGSI  60
   61 WRVSWAHPEF GQVVATCSFD RTASVWEEVI GEKVSSTNTP TRRWVRRTTL VDSRTSVTDV 120
  121 EFAPKYLGLL LATASADGII RIYEAPDIMN LSQWPVQHEI SNKLPLSCLS WNTSTYMVTQ 180
  181 LLAAGSDEAA TPTGKVFLFA YSENSRKCVK IDTVNDITDP VTDVAFAPNA GRTFHMLAVA 240
  241 SKDLYIVNLR GVTDATDISK LDIQTIKFSE HNCPVWRVCW NMLATMLIST GDDGCVRLWR 300
  301 MNYNRQWRCA AVLKAEGSGP TYEPAPPTPT LATTASATAK FYKKGTIGNQ VPWH

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Detection Method: PSI-BLAST
Confidence: 46.0
Match: 2pm7B
Description: No description for 2pm7B was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle