YRC Public Data Repository - Protein Structure Prediction

Protein:	CG14763-PA, FBpp...
Organism:	Drosophila melanogaster
Length:	189 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG14763-PA, FBpp....

Description	E-value	Query Range	Subject Range
gi\|2137803, gi\|7... - gi\|709816\|gb\|AAA81011.1\| t complex testis-specific protein, pir\|\|I49278 t complex testis-specific pr...	215.0	[0..7]	[189..2]
gi\|34854128 - gi\|34854128\|ref\|XP_344847.1\| PREDICTED: similar to t-complex-associated testis expressed 3 isoform 1...	201.0	[0..7]	[189..2]
gi\|109073345 - gi\|109073345\|ref\|XP_001084185.1\| PREDICTED: similar to t-complex-associated-testis-expressed 3 [Maca...	198.0	[0..7]	[189..2]
TCTE3 - t-complex-associated-testis-expressed 3	196.0	[0..7]	[189..2]
gi\|114610289 - gi\|114610289\|ref\|XP_001138699.1\| PREDICTED: t-complex-associated-testis-expressed 3 [Pan troglodytes...	195.0	[0..7]	[189..2]

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Predicted Domain #1

Region A:
Residues: [1-189]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDSPEERRS KDVVPETAAK EAETGKGKKE KKEKSAEGTK PRPASSQRGS LTKSHMGVSL  60
   61 PMGAPAAKPT MRFMPTYRLE SKNPLNKERV ENIIKAVMNR HYNDEYMFHP KHSLHMAAQV 120
  121 SEEIKNRIKL DNYDRYRYIV LVTVGEFLMQ GLYSMVNFLW DAEKDGFVTY SVERPSYFAV 180
  181 CTTFYLYYD

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Detection Method:	PSI-BLAST
Confidence:	36.39794
Match:	1ygtA
Description:	Dynein Light Chain TcTex-1
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits