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View Structure Prediction Details

Protein: Or43b-PA
Organism: Drosophila melanogaster
Length: 403 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Or43b-PA.

Description E-value Query
Range
Subject
Range
gi|85861099 - gi|85861099|gb|ABC86499.1| IP02091p [Drosophila melanogaster]
216.0 [0..3] [403..6]

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Predicted Domain #1
Region A:
Residues: [1-165]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGHFKLVYP APISEPIQSR DSNAYMMETL RNSGLNLKND FGIGRKIWRV FSFTYNMVIL  60
   61 PVSFPINYVI HLAEFPPELL LQSLQLCLNT WCFALKFFTL IVYTHRLELA NKHFDELDKY 120
  121 CVKPAEKRKV RDMVATITRL YLTFVVVYVL YATSTLLDGL LHHRV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [166-238]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PYNTYYPFIN WRVDRTQMYI QSFLEYFTVG YAIYVATATD SYPVIYVAAL RTHILLLKDR  60
   61 IIYLGDPSNE GSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [239-403]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPSYMFKSLV DCIKAHRTML NFCDAIQPII SGTIFAQFII CGSILGIIMI NMVLFADQST  60
   61 RFGIVIYVMA VLLQTFPLCF YCNAIVDDCK ELAHALFHSA WWVQDKRYQR TVIQFLQKLQ 120
  121 QPMTFTAMNI FNINLATNIN VAKFAFTVYA IASGMNLDQK LSIKE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle