YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG30493-PB
Organism: Drosophila melanogaster
Length: 326 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG30493-PB.

Description E-value Query
Range
Subject
Range
gi|18447632 - gi|18447632|gb|AAL68377.1| SD02734p [Drosophila melanogaster]
346.0 [0..1] [326..1]

Back

Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANVRCLYKL IRLQKLLLPL NATSSRLAPL QPRPLTFLIA RSYGKDEKKA NLEDFRAREE  60
   61 QRERERDAAD QAAEKASQKE AGGGGGLGAK GSESTG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [97-326]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PEDDAKQAKV DAIRAKILDA ALQHVPQQGW TRQAIILGAE ESGYPSVVHG MFPEGGFALV  60
   61 SHFNGKCNAQ LVESLQQKTD GGKQEVEDPL DFLVQAVRQR LEMVTPYKTH WPQAMALLAQ 120
  121 PQHAPTALAQ VLTLVDDICY YSGDRSVDFG WYTRRVGLAT IMKMTELYFL QDKSPGHAQT 180
  181 WEFLKSRMDE AVQLQMMLSQ TEGMTHTFQR SFNSAFITAR NILGLGYNRN 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.0
Match: 2oflA
Description: No description for 2oflA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle