| Protein: | Rpt1-PA |
| Organism: | Drosophila melanogaster |
| Length: | 433 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Rpt1-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
404.0 | [0..1] | [433..474] |
|
Region A: Residues: [1-433] |
1 11 21 31 41 51
| | | | | |
1 MPDYLGDDQR KVKHDEKEDK EIKSLDEGDI ELLKTYGQSQ YHKSIKSIEE DIQKAVKQVN 60
61 ELTGIKESDT GLAPPALWDL AADKQILQNE QPLQVARCTK IINADSDDPK YIINVKQFAK 120
121 FVVDLADSVA PTDIEEGMRV GVDRNKYQIH IPLPPKIDPT VTMMQVEDKP DVTYSDVGGC 180
181 KEQIEKLREV VETPLLHPEK FVNLGIEPPK GVLLFGPPGT GKTLCARAVA NRTDACFIRV 240
241 IGSELVQKYV GEGARMVREL FEMARSKKAC LIFFDEIDAI GGARFDDGAG GDNEVQRTML 300
301 ELINQLDGFD PRGNIKVLMA TNRPDTLDPA LMRPGRLDRK VEFGLPDQDG RSHIFKIHAR 360
361 SMSVERDIRF DLLARLCPNS TGAEIRSVCT EAGMFAIRAR RKVATEKDFL EAVKKVIKSY 420
421 AKFSATPRYM TYN
|
| Detection Method: |  |
| Confidence: | 73.0 |
| Match: | 1oz4A |
| Description: | VCP/p97 |
Matching Structure (courtesy of the PDB): |
|
