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View Structure Prediction Details

Protein: scra-PA
Organism: Drosophila melanogaster
Length: 1212 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for scra-PA.

Description E-value Query
Range
Subject
Range
scra-PB - The gene scraps is referred to in FlyBase by the symbol Dmel\scra (CG2092, FBgn0261385). It is a pro...
623.0 [0..1] [1212..1]

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Predicted Domain #1
Region A:
Residues: [1-81]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPFTQHMLE KAEQRSRALG ISNASKFPLV ECSVPSSSAT SASGGDAGVL APRSRSPGGQ  60
   61 SAASGGGKVV TLGKATLEAS P

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [82-318]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AKPLRHYTAV NKENLDMGIE INITTDKPIG VQVEIQEQEV TDDEEQAEGG ALNPLLEAEP  60
   61 VNQPLARLRD TSRSRLQRMG ALYSNTDDLS SPIHRTEGQF HVTTGEEEDC GNRSSRQPKQ 120
  121 RLGKLAALAD TINQWEDDTS HHEVHRLLEA PPPKPHLSSR RAEKGPAPLP PKKDEVDEAS 180
  181 RTKQLKWDPK EEAAPASKVE DAVLTAKPPV PQKSTTVSQV AKNFASSAPA PKPAPAP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [319-378]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AVSVKSGLVS GRAALFENKG TGGQSQGLRN QKDPCELSLK ERMKLFETGN NKAMLPMAPI  60
   61 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [379-471]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSAPSITQIR AEEVKQHLAA MHPVTAAAAT TVVAATKPKQ ENKLRDKVAA LVANAQSSAE  60
   61 TRIKDIDRQR QEDMQIISNR FNKQKELFDN QPS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [472-695]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSSVAAQARP PAPAPSRVVR PMPPPPPPPI AALSPGLASS KRRSPGDAPT TDEDSKRARK  60
   61 SHSDRLYPAL SDLDSSGDNC CAAETASATD DSHQQDEEET ESCMDESDDQ SQTEDSSAGM 120
  121 CNGSLGREIM SAVQRNEVEM QQQQTGKKTV RYADQDMYYD DSSLNSSQVS AGIDDYLDEA 180
  181 LVEDYGSTQD DQSDSGDEQN ASRLSLGSKG TTASNSFSFR KNPA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [696-911]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SICTPIEEHH EMEMDLQTPL LSGAQPVKSE LSVNQDNDNL VTLVHTVSFY RRQQSANSSN  60
   61 STPVRKICRE QQVMRSALAG DCHAKHRLEY DSPQQSDYVA AATDIADQTD EDDEEMQNAR 120
  121 EVNDASQAQD KIKKLLSEVC KQQQVIGQAS QALNLCAATV EFSGSTESVE GERYLLLATH 180
  181 RRQACLDEVQ RLRVENSIRP VGAPKEKGLL TVKDIT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [912-1024]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPLRQEYVRK MASNNINGHH LVCLLKYNEH VLATKTVPTM PGLLSVKFPD VLQLNNVYAD  60
   61 FRITLEIYGM LAQRDQLPHE LKYHINLNKK GGIKTPKKKG GENRLVMPPV QSP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [1025-1212]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AGPHVVRTPQ LVQYGFAIFS LREIQRTTWT LTQVLGVSPL EGVVHMKVNC ELSVSVEYKG  60
   61 FLTMFEDISG FGAWHRRWCY LNGSVINYWK YPDDEKRKTP MGSIDLNSCT SQKVTTAPRD 120
  121 ICARLNTMLL ECERPALETD QESLIIVPNG RTTTVRHLLS ADTKEEREEW CAYLNKALTL 180
  181 LRAWGTTH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.154902
Match: 1u27A
Description: Triglycine variant of the ARNO Pleckstrin Homology Domain in complex with Ins(1,3,4,5)P4
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle