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View Structure Prediction Details

Protein: gi|7304194, gi|2...
Organism: Drosophila melanogaster
Length: 1379 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7304194, gi|2....

Description E-value Query
Range
Subject
Range
Corin-PB, FBpp03... - The gene Corin is referred to in FlyBase by the symbol Dmel\Corin (CG2105, FBgn0033192). It is a pro...
608.0 [0..1] [1379..1]

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Predicted Domain #1
Region A:
Residues: [1-238]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNALDMNKQF LSVSQDHQHQ TSVADQRSRS RSERASSLAL PLNSLLDFYD KQQEQCKSVT  60
   61 LLPLPSNSGS ISESSSLSSS NSIVRRHSSH YYPMLEDKQK PSQLPQAATE MLVNMTEQKY 120
  121 CQSAHQGASI AGGRQVHHQQ QHLVRVDTPV TPPPPIPRRL LRGKSAWQAS SPHPLPLSAG 180
  181 GQDGAHGTGT GTVFVYPQPE NVTAEAVVRG SGDGQGGGGA GLQSALLVDI ATRPASGY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [239-402]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ADADGISDDD RMSLENSVFD ESLTSTPVKV AGYLAGRYAG LSHMAKRAQR SSSSTVDSAY  60
   61 GSSLGGHSER FASSSTSKPL SSSIDSPLAR DPRDAYRERA VLNDAMHKLN NNNTSLGLAL 120
  121 YSASNNNNGS SVASDGSQLP VVPARKQPPP VKGSSNSSNS IGET

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [403-478]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QSQSSKEPSS VSASASTSSA ASAGSSTISS GTMSSMSGPC PAVVPPTDAI TKRPGPPEPP  60
   61 LRQANVFDPV ETGSRG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [479-597]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HPPPPLTVRN KLGRNKPPPI TYPRMQQRQD STLSSDSYSI SSSPGYNSKL MEAPLLGSQQ  60
   61 GGRKSNAPGS AQRQTPLMDL APTRFLGGAG GGTGSGKQGP AMPPPRSKIN FRQDSTISS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [598-674]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSFSQTSSPG YNPKLMEAPL LPSLSAKRLC SAPAPIVCRQ GVQHEPIEEL EPPQTISPLH  60
   61 KAAGQPSSLQ TIVRFQN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [675-748]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GAPHTMSLQH QIINRRKSSN PYITNGRLKF RLFQILINAF ALLAIAGGLA AYFNAYPTIK  60
   61 FVNKTIINTI HVED

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.69897
Match: 2eroA
Description: No description for 2eroA was found.

Predicted Domain #7
Region A:
Residues: [749-1379]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTSFGKNPAP GTCLPIIVRF CQGPQIPYNY TVFPNYIGHF GQLETQTDLD SYEALVDVRC  60
   61 YELVSLFLCT LFVPKCGQSG ATVPPCKTLC TETMRRCGFF FDVFGLSLPE YLNCKLFKDF 120
  121 PSSEDCVGLD EVREVMRAAT HPKCDGFQCD QNRCLPQEYV CDGHLDCMDQ ADEAKCERCG 180
  181 PDEIYCGDSQ CIGTKHICDG IIDCPYGQDE RNCLRLSERN GDVGTGVLEV YRIGQRQWMP 240
  241 ACVKNWDRAV SPSAVCSILG YSAVNATSVL TQLTHRPLLA TVNVSTDIWK MYAKRKSTLM 300
  301 QEFANCKKTE DYPMADLTCS NYECGRVKRG RHKPSRRIIG GTQASPGNWP FLAAILGGPE 360
  361 KIFYCAGVLI SDQWVLTASH CVGNYSVIDL EDWTIQLGVT RRNSFTYSGQ KVKVKAVIPH 420
  421 PQYNMAIAHD NDIALFQLAT RVAFHEHLLP VCLPPPSVRN LHPGTLCTVI GWGKREDKDP 480
  481 KSTYEYIVNE VQVPIITRNQ CDEWLDNLTV SEGMVCAGFD DGGKDACQGD SGGPLLCPYP 540
  541 GEKNRWFVGG IVSWGIMCAH PRLPGVYANV VQYVPWIQEQ IAKHSRPIKE DRVNKYDLHP 600
  601 GGPDILSKIA TDPMREGAPH HYTHSRTSSK N

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 92.0
Match: 2f83A
Description: No description for 2f83A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle