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View Structure Prediction Details

Protein: gi|24586240, gi|...
Organism: Drosophila melanogaster
Length: 362 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24586240, gi|....

Description E-value Query
Range
Subject
Range
gi|49642276 - gi|49642276|emb|CAH00238.1| KLLA0D01639p [Kluyveromyces lactis]
gi|50306337, gi|... - gi|50306337|ref|XP_453142.1| unnamed protein product [Kluyveromyces lactis], gi|49642276|emb|CAH0023...
229.0 [0..1] [302..9]

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Predicted Domain #1
Region A:
Residues: [1-213]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPIDMDIPKE AESNDKFIVK YRQQYYDLSR FMHKHPGGIN TLKGLNSGDM TARFLKAPPH  60
   61 SDAAMYLMRE YKIDPEDSRK PKSSQRETLH HDEDGTLRQR PRETEDKNNN QVDDSMEHLV 120
  121 DWSKAMLPQI ANITDCYDEW VHKPVDRPLR LFDPWYLEMC TKTPWWLVPL FWIPVIVKCA 180
  181 VEEFTTAWQD SNQVTGCVLR LLFIWRAPVV FPG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.0
Match: 1fcbA
Description: Flavocytochrome b2, C-terminal domain; Flavocytochrome b2, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [214-362]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VHTAPLGVPR EAEQQERKLA MHLPLHDPWP APQGALRSDA TGVSAPSRRS ARRGHLHPAQ  60
   61 LCPVPSASDL VWSSGRLSVL RYDALLPALW EPFAMGLCTH EALSSPPPLL APNSRLRHQQ 120
  121 SLVGCRLQNE NPSPQAEIPT ALVLAAING

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle