| Protein: | vimar-PB |
| Organism: | Drosophila melanogaster |
| Length: | 634 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for vimar-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
280.0 | [0..1] | [634..1] |
|
Region A: Residues: [1-555] |
1 11 21 31 41 51
| | | | | |
1 MATEIDDLIE KLKTTSVSPA NTTNLLCEIS ATKDPKLFDK HELAECFLGL TKCDDTNVRK 60
61 EAAKCIAEIT KSEVQRKKFT KRNIIAAFLE CLRQVPTSDG SMELPIQICR ALGNICYLND 120
121 EARDLILELE GDAVLLRLLD ITTIEDVANA AQFIKVRGGL LSNYLLGGEG LAKRAMELGV 180
181 MKKLQGIIDI GASNVEQHED LLLNTLPLLS ILTENVSDLN FDSSLNIQLS RILAASTNPD 240
241 LAEMCLELLH YQAESDEVKL ILAKDGLCET IYNLLEKYKT LASTSEARAL MKLACELIVL 300
301 ILTGDDSMHY LYTTPLLKNM VDWLDSTDID LLTTGVLALG NFARTDSHCI YFVEQQTMNK 360
361 LLEVLAKNNG VKDDVRLQHA LLSALRNLVI PKPNKNAVIQ AGLVQTILPM LEIHQPPVVF 420
421 KLLGTLRMTV DGQEKLALEL LKNKTLIEQL VHWSKSSDYA GVTGESLRLM AWLIKHAYLS 480
481 KIAYALPRKG DAPAEQIADK IPLTQDYDRS SLSEFLANEG TVEAMVSMLT AQHLVMQNEA 540
541 LIALCILSVV YLSQP
|
| Detection Method: |  |
| Confidence: | 62.0 |
| Match: | 2gl7A |
| Description: | No description for 2gl7A was found. |
| Term | Confidence | Notes |
| binding | 0.373576425899935 | bayes_pls_golite062009 |
|
Region A: Residues: [556-634] |
1 11 21 31 41 51
| | | | | |
1 SEAAQAQLLQ DELVKCEVGK KLAELISKSS DTMTKEIVEN LQNCVNLLKS SEQLVAHLEQ 60
61 HNINELLKSI PILTEYCTL
|
| Detection Method: | |
| Confidence: | 61.154902 |
| Match: | 1q1sC |
| Description: | Mouse Importin alpha- phosphorylated SV40 CN peptide complex |
Matching Structure (courtesy of the PDB): |
|
