YRC Public Data Repository - Protein Structure Prediction

Protein:	FBpp0307720, FBp...
Organism:	Drosophila melanogaster
Length:	291 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0307720, FBp....

Description	E-value	Query Range	Subject Range
gi\|45550373, gi\|... - gi\|45550373\|ref\|NP_610248.2\| CG3358-PB, isoform B [Drosophila melanogaster], gi\|45445443\|gb\|AAM70836...	319.0	[0..1]	[291..23]
TATD1_MOUSE - Putative deoxyribonuclease TATDN1 OS=Mus musculus GN=Tatdn1 PE=1 SV=1	308.0	[0..1]	[284..17]
gi\|54635339, gi\|... - gi\|54635339\|gb\|EAL24742.1\| GA17403 [Drosophila pseudoobscura pseudoobscura], gi\|125806782\|ref\|XP_001... gi\|125806782\|ref... - GA17403-PA [Drosophila pseudoobscura], GA17403 [Drosophila pseudoobscura pseudoobscura]	305.0	[0..1]	[284..1]
gi\|57095336 - gi\|57095336\|ref\|XP_532325.1\| PREDICTED: similar to TatD DNase domain containing 1 [Canis familiaris]	304.0	[0..1]	[284..17]
TATD1_BOVIN - Putative deoxyribonuclease TATDN1 OS=Bos taurus GN=TATDN1 PE=2 SV=1	303.0	[0..1]	[289..17]
gi\|109087416 - gi\|109087416\|ref\|XP_001101992.1\| PREDICTED: similar to TatD DNase domain containing 1 isoform 2 [Mac...	301.0	[0..1]	[284..17]
TATDN1 - TatD DNase domain containing 1	300.0	[0..1]	[284..17]
gi\|108868492, gi... - gi\|157108913\|ref\|XP_001650441.1\| hypothetical protein AaeL_AAEL015062 [Aedes aegypti], gi\|108868492\|...	292.0	[0..1]	[284..26]
gi\|116126925, gi... - gi\|118787695\|ref\|XP_316220.3\| ENSANGP00000017717 [Anopheles gambiae str. PEST], gi\|116126925\|gb\|EAA1...	289.0	[0..1]	[284..23]

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Predicted Domain #1

Region A:
Residues: [1-291]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFQGCYGGTQ KHEPDLHIVL ERAWQQGLQK VIVTAGCLKD VDEALELASK DERIYTTVGT  60
   61 HPTRCEEFVP DPEGYYDQLR SRIKANRTKV RAVGECGLDY DRLHFCAQET QRLYFEKQLD 120
  121 LAAEFKLPLF LHMRNAAEDF MGILERNRNK IEECGGGVVH SFTGTLEEAQ RILAFGGLYI 180
  181 GFNGCSLKTD ENAEVVRKLP NDRIMLETDC PWCGIRPSHA GHKHVTTKFP TVKKKEKWTA 240
  241 ESLIDGRCEP CQISQVLESI AGIKQEPKEQ LAALYYQNTL DLFFGTGESK E

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	72.045757
Match:	2gzxA
Description:	No description for 2gzxA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits