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View Structure Prediction Details

Protein: Spn4-PB
Organism: Drosophila melanogaster
Length: 424 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Spn4-PB.

Description E-value Query
Range
Subject
Range
gi|481621 - gi|481621|pir||S38962 serpin - pig
374.0 [0..38] [411..1]

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Predicted Domain #1
Region A:
Residues: [1-424]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYRLVPCGC WLLPLLGLAL FPFPPVHTAD VTMADAAHQE FARRLALFSI NVYGKLSGQK  60
   61 PGENIVFSPF SIQTCAAMAR LGAENETATQ LDQGLGLASS DPEQIAHSFH QVLAAYQDSQ 120
  121 ILRIANKIFV MDGYQLRQEF DQLLSKQFLS AAQSVDFSKN VQAAATINNW VEQRTNHLIK 180
  181 DLVPADVLNS ESRLVLVNAI HFKGTWQHQF AKHLTRPDTF HLDGERTVQV PMMSLKERFR 240
  241 YADLPALDAM ALELPYKDSD LSMLIVLPNT KTGLPALEEK LRLTTLSQIT QSLYETKVAL 300
  301 KLPRFKAEFQ VELSEVFQKL GMSRMFSDQA EFGKMLQSPE PLKVSAIIHK AFIEVNEEGT 360
  361 EAAAATGMAV RRKRAIMSPE EPIEFFADHP FTYVLVHQKD LPLFWGSVVR LEENTFASSE 420
  421 HDEL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 94.522879
Match: 2dutA
Description: No description for 2dutA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle