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View Structure Prediction Details

Protein: coro-PC, coro-PB...
Organism: Drosophila melanogaster
Length: 528 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for coro-PC, coro-PB....

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
554.0 [0..4] [528..1186]

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Predicted Domain #1
Region A:
Residues: [1-395]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFRVVRSSK FRHVYGQALK REQCYDNIRV SKSSWDSTFC AVNPKFLAII VESAGGGAFI  60
   61 VLPHNKVGRI AADHPLVGGH KGPVLDIAWC PHNDNVIASG SEDCVVKVWQ IPDGGLSRTL 120
  121 TEPVVDLVFH QRRVGLVLWH PSALNVLLTA GSDNQVVIWN VGTGEILVHI DSHPDIVYSA 180
  181 CFNWDGSKLV TTCKDKKIRI YDPRTAELES EAMCHEGSKA TRAIFLRHGL IFTTGFNRSS 240
  241 ERQYSLRAPD ALNEPIVMVE LDTSNGVMFP LYDADTNMIY LCGKGDSVIR YFEVTPEPPF 300
  301 VHYINTFQTT EPQRGIGLMP KRGCDVTTCE VAKFYRMNNN GLCQVISMTV PRKSDLFQED 360
  361 LYPDTLAEDA AITAEEWIDG KDADPITFSL KGGYV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 87.154902
Match: 2aq5A
Description: Crystal Structure of Murine Coronin-1
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [396-528]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSSVNKSLPA KKAGNILNKP RGDSASSGAT SSSAGGGNFA SGNNNEASEG GPPAAVLSEK  60
   61 DLRTIQDEIR KLKAIIVKQE NRIRALEAKE DARNKNGSDA APASAGAATS DGKASESAND 120
  121 HASTSAGTSK DED

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.69897
Match: 1k8kC
Description: Arp2/3 complex 41 kDa subunit ARPC1
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle