YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ZIP1-PA
Organism: Drosophila melanogaster
Length: 352 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ZIP1-PA.

Description E-value Query
Range
Subject
Range
gi|47575691, gi|... - gi|47575691|gb|AAT35823.1| root iron transporter protein [Malus xiaojinensis], gi|27549575|gb|AAO170...
197.0 [0..5] [343..35]

Back

Predicted Domain #1
Region A:
Residues: [1-169]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSATATMSQE QTQDVDHHAL LVAKIVSMVV LVVITVLCGS LPYVLNRCFH WTKASPEETR  60
   61 SSLVVRCLLF FGGGVLICTT FLHMLPEVIE VVEALQECGS LVKTPFALAE MLLCTGFFLM 120
  121 YALDELMTSL VRHHQGKLSR KESVASLAFE RGRSIRHSVL LNPQAKEEV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [170-352]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EVKDTEPQPH KDHHGHSHMP VPADDGSSAR GLGIILALSL HELFEGMAIG LEGTVSTVWF  60
   61 MFGAVSAHKL VLAFCVGMEL LVARTRSSLA ILYLVTFSIV TPIGIGVGLG ISQQVAAGQP 120
  121 SLPSGVLQGI ACGTLLYVVF FEILIESHAG WRALVAAVAG FALMFGLQIL SDEAEGDDSL 180
  181 TCS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle