YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG9410-PB
Organism: Drosophila melanogaster
Length: 242 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG9410-PB.

Description E-value Query
Range
Subject
Range
gi|40882573 - gi|40882573|gb|AAR96198.1| AT21859p [Drosophila melanogaster]
210.0 [0..18] [242..2]

Back

Predicted Domain #1
Region A:
Residues: [1-81]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKGSTLKAL DVRILWPLIE TRSAGKCKLH NPRPTPNRNI AAAKLIVTLR LLLSCCSGGH  60
   61 QRSFSSSTHR SYITFNDFRK K

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [82-242]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HRWYTKKELV GYSMQDMYSV VSDVSNYHKF VPYVKRSDVH SRGSEGFKAD LIVGFPPLNE  60
   61 AYTSQVTLVP PSLVKSECHD GRLFNYLLNE WSFKPGLKDI PNSCVLDFKV SFEFKSLLHS 120
  121 NVANIFFDLI CDQMENAFIQ EVRRRSGPPS IRSHVLTSDR S

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.522879
Match: 1t17A
Description: Solution Structure of the 18 kDa Protein CC1736 from Caulobacter crescentus: The Northeast Structural Genomics Consortium Target CcR19
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.453951550198712 bayes_pls_golite062009
catalytic activity 0.0116392906163881 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle