| Protein: | CG7843-PC, CG784... |
| Organism: | Drosophila melanogaster |
| Length: | 943 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG7843-PC, CG784....
| Description | E-value | Query Range |
Subject Range |
|
|
414.0 | [0..1] | [943..1] |
|
Region A: Residues: [1-140] |
1 11 21 31 41 51
| | | | | |
1 MGDSDDEYDR KRRDKFRGER ESYRTERRDD RRPVGGSAGA RDEWAERNPF RGGASAGGGG 60
61 ARHRPDYSDY RGPGARPRYG SPVRDLPPAK RMRPDWGDGD VRANPRFGGY DPYLMQAWND 120
121 HYQSMHSAYS HGGHAPPVRE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [141-473] |
1 11 21 31 41 51
| | | | | |
1 SIGGGGGDTL TQPAMLNLKQ FLDTQDENIS DSEVMRKYTE YKTDFKRQQL NEFFVAHKDE 60
61 EWFKNKYHPE DSVKRSEEQR GFLQRRTDVF MELLENGTIG SVKVDSSQAD ALIRVLDTCV 120
121 IKLEGGTDED LKVLDEKPKD PVVYERKAEQ MQSVKEVEKT INSPKEEMSE ADPVSTQRKP 180
181 VRPVNSDGEN WDDDDAENSA PKKELAEDSK DSDSKPEDKQ LNKKKTKKRK RNSSDDDSSS 240
241 SESSSSSDEE KLKEKYDVED GLRAEQKTEA EKDRQEATKA KQGPQSPKLD EDEGNENTEP 300
301 KGLDSKINTY EEIDNTLKSP EISSNPIKNT DNG
|
| Detection Method: | |
| Confidence: | 14.09691 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [474-774] |
1 11 21 31 41 51
| | | | | |
1 DGSKVEEDGE KPSVGKDKVV ETETIDLDKV KDGQPRALHR TSSIFLRNLA PSITRSEIEA 60
61 VCNRFSGYLR VAIADPLVER RWYRRGWITF MRDVNIKEIC WGLNNQRLRD CEMGAIVNRD 120
121 LSRRVRPANG ITAHKQVVRS DIKLCAKIAL NLDEKFRLWA EGPKDDSNSA RANESSENGS 180
181 GSTYGFNSQN PVLQNITDYL IEEASAEEEE LLGLTGENKD TEGEPIERDE QLISVLDRLV 240
241 LYLRIVHSVD YYNHCEYPYE DEMPNRCGII HARGPPPVRV TNNDVQEYIK IYESKLQQFL 300
301 T
|
| Detection Method: | |
| Confidence: | 6.0 |
| Match: | 1c1gA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [775-854] |
1 11 21 31 41 51
| | | | | |
1 KTVPLSDEEI KNLGAKDAET EVEKFVQANT QELAKDKWLC PLSGKKFKGP EFIRKHIFNK 60
61 HEEKVDEVRK EVQYFNNYLR
|
| Detection Method: | |
| Confidence: | 1.68 |
| Match: | 1zr9A |
| Description: | Solution Structure of a Human C2H2-type Zinc Finger Protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.10390473497952 | bayes_pls_golite062009 |
| nucleic acid binding | 0.12509788406479 | bayes_pls_golite062009 |
| DNA binding | 0.113899721441384 | bayes_pls_golite062009 |
|
Region A: Residues: [855-943] |
1 11 21 31 41 51
| | | | | |
1 DPKRPQLPEH PGTSKRPESE SARGGGGGYR PPMYPPFSAM PYGFGPPMMG GGRGGRNFPP 60
61 ARRELPLEHQ RRLIGYHDLD APANSDMFD
|
| Detection Method: | |
| Confidence: | 4.522879 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
