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View Structure Prediction Details

Protein: Or42b-PA
Organism: Drosophila melanogaster
Length: 399 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Or42b-PA.

Description E-value Query
Range
Subject
Range
gi|125810046, gi... - gi|54636511|gb|EAL25914.1| Or42b [Drosophila pseudoobscura pseudoobscura], gi|125810046|ref|XP_00136...
gi|125810046|ref... - GA11791-PA [Drosophila pseudoobscura], Or42b [Drosophila pseudoobscura pseudoobscura]
224.0 [0..1] [399..1]

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Predicted Domain #1
Region A:
Residues: [1-120]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFELIRPAP LTEQKRSRDG CIYLYRAMKF IGWLPPKQGV LRYVYLTWTL MTFVWCTTYL  60
   61 PLGFLGSYMT QIKSFSPGEF LTSLQVCINA YGSSVKVAIT YSMLWRLIKA KNILDQLDLR 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [121-255]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CTAMEEREKI HLVVARSNHA FLIFTFVYCG YAGSTYLSSV LSGRPPWQLY NPFIDWHDGT  60
   61 LKLWVASTLE YMVMSGAVLQ DQLSDSYPLI YTLILRAHLD MLRERIRRLR SDENLSEAES 120
  121 YEELVKCVMD HKLIL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [256-399]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RYCAIIKPVI QGTIFTQFLL IGLVLGFTLI NVFFFSDIWT GIASFMFVIT ILLQTFPFCY  60
   61 TCNLIMEDCE SLTHAIFQSN WVDASRRYKT TLLYFLQNVQ QPIVFIAGGI FQISMSSNIS 120
  121 VAKFAFSVIT ITKQMNIADK FKTD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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