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View Structure Prediction Details

Protein: Or42a-PA
Organism: Drosophila melanogaster
Length: 406 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Or42a-PA.

Description E-value Query
Range
Subject
Range
gi|85861099 - gi|85861099|gb|ABC86499.1| IP02091p [Drosophila melanogaster]
248.0 [0..1] [406..2]

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Predicted Domain #1
Region A:
Residues: [1-107]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLRRWFPTL YTQSKDSPVR SRDATLYLLR CVFLMGVRKP PAKFFVAYVL WSFALNFCST  60
   61 FYQPIGFLTG YISHLSEFSP GEFLTSLQVA FNAWSCSTKV LIVWALV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [108-231]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KRFDEANNLL DEMDRRITDP GERLQIHRAV SLSNRIFFFF MAVYMVYATN TFLSAIFIGR  60
   61 PPYQNYYPFL DWRSSTLHLA LQAGLEYFAM AGACFQDVCV DCYPVNFVLV LRAHMSIFAE 120
  121 RLRR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [232-406]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGTYPYESQE QKYERLVQCI QDHKVILRFV DCLRPVISGT IFVQFLVVGL VLGFTLINIV  60
   61 LFANLGSAIA ALSFMAAVLL ETTPFCILCN YLTEDCYKLA DALFQSNWID EEKRYQKTLM 120
  121 YFLQKLQQPI TFMAMNVFPI SVGTNISVTK FSFSVFTLVK QMNISEKLAK SEMEE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle