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View Structure Prediction Details

Protein: gi|24585844, gi|...
Organism: Drosophila melanogaster
Length: 733 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24585844, gi|....

Description E-value Query
Range
Subject
Range
CG42345-PA - This gene is referred to in FlyBase by the symbol Dmel\CG42345 (CG42345, FBgn0259247). It is a prote...
620.0 [0..1] [733..52]

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Predicted Domain #1
Region A:
Residues: [1-138]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSFWQQHVA TPSSSTPFDS PFFSATHGLV QTHPSIGGSH SGPAPLNGNS LGSGAPSSIL  60
   61 AGTKPALTAG SGYLNSRGSL PTSARYPANK ITGTVVEPNP KSPFRHLDFS TSATAELRRN 120
  121 PALSAPDECA RACREGEP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [139-733]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PRICYYHFTL EYYTVLGAAC QVCTPNATNT VWSHCQCVLA DGVERGILTA NRMIPGPSIQ  60
   61 VCENDKVVID VENHMEGMEV TIHWHGIWQR GSQYYDGVPF VTQCPIQQGN TFRYQWTGNA 120
  121 GTHFWHAHTG LQKLDGLYGS VVVRQPPSRD PNSHLYDFDL TTHIMLISDW LHEDAAERYP 180
  181 GRLAVNTGQD PESMLINGKG QFRDPNTGFM TNTPLEIFTI TPGRRYRFRM INAFASVCPA 240
  241 QVTIEGHGMT VIATDGEPVH PVDVNTIISF SGERYDFVIS ADQPVGAYWI QLRGLGECGI 300
  301 RRAQQLAILR YARGPYQPAS SPPTYDVGIP QGVVMNPLDA QCNRQRNDAI CVSQLKNALE 360
  361 IDRGILAEKP DVKIFLPFRF FVYRAEDLFQ PNTYNRFLVA PTGDHVISLI DEISYLSAPA 420
  421 PLTSQYNDIN PDQFCNGDNR PADCGPNCMC THKIDIPLNA IVEVVLVDEV QQPNLSHPFH 480
  481 LHGYGFSVIG IGRSPDSSVK KINLKHALDL DRRGLLHRQY NLPPTKDTIA VPNNGYVVLR 540
  541 FRADNPGFWL FHCHFLFHIV IGMNLILQVG TNADLPPVPP GFPTCGDHTP SIPIN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 95.045757
Match: 2hrgA
Description: No description for 2hrgA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle