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View Structure Prediction Details

Protein: CG42345-PA
Organism: Drosophila melanogaster
Length: 784 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG42345-PA.

Description E-value Query
Range
Subject
Range
gi|23240180, gi|... - gi|24585840|ref|NP_610170.1| CG30437-PC, isoform C [Drosophila melanogaster], gi|23240180|gb|AAN1612...
665.0 [0..1] [781..1]

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Predicted Domain #1
Region A:
Residues: [1-189]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAMDLNGFY QTFISFLIWG AFSNFPEVFA VRVANSQQNQ PKKENQPDLT PMGSFWQQHV  60
   61 ATPSSSTPFD SPFFSATHGL VQTHPSIGGS HSGPAPLNGN SLGSGAPSSI LAGTKPALTA 120
  121 GSGYLNSRGS LPTSARYPAN KITGTVVEPN PKSPFRHLDF STSATAELRR NPALSAPDEC 180
  181 ARACREGEP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [190-784]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PRICYYHFTL EYYTVLGAAC QVCTPNATNT VWSHCQCVLA DGVERGILTA NRMIPGPSIQ  60
   61 VCENDKVVID VENHMEGMEV TIHWHGIWQR GSQYYDGVPF VTQCPIQQGN TFRYQWTGNA 120
  121 GTHFWHAHTG LQKLDGLYGS VVVRQPPSRD PNSHLYDFDL TTHIMLISDW LHEDAAERYP 180
  181 GRLAVNTGQD PESMLINGKG QFRDPNTGFM TNTPLEIFTI TPGRRYRFRM INAFASVCPA 240
  241 QVTIEGHGMT VIATDGEPVH PVDVNTIISF SGERYDFVIS ADQPVGAYWI QLRGLGECGI 300
  301 RRAQQLAILR YARGPYQPAS SPPTYDVGIP QGVVMNPLDA QCNRQRNDAI CVSQLKNALE 360
  361 IDRGILAEKP DVKIFLPFRF FVYRAEDLFQ PNTYNRFLVA PTGDHVISLI DEISYLSAPA 420
  421 PLTSQYNDIN PDQFCNGDNR PADCGPNCMC THKIDIPLNA IVEVVLVDEV QQPNLSHPFH 480
  481 LHGYGFSVIG IGRSPDSSVK KINLKHALDL DRRGLLHRQY NLPPTKDTIA VPNNGYVVLR 540
  541 FRADNPGFWL FHCHFLFHIV IGMNLILQVG TNADLPPVPP GFPTCGDHTP SIPIN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 96.69897
Match: 2hrgA
Description: No description for 2hrgA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle