YRC Public Data Repository - Protein Structure Prediction

Protein:	Df31-PF, Df31-PA...
Organism:	Drosophila melanogaster
Length:	183 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Df31-PF, Df31-PA....

Description	E-value	Query Range	Subject Range
gi\|2459890, gi\|1... - gi\|33329021\|gb\|AAQ09917.1\| Df31 [Drosophila yakuba], gi\|2459890\|gb\|AAB81478.1\| anon1A4 [Drosophila y...	153.0	[0..1]	[183..1]
gi\|125987309, gi... - gi\|54645748\|gb\|EAL34486.1\| GA15302 [Drosophila pseudoobscura pseudoobscura], gi\|125987309\|ref\|XP_001... gi\|125987309\|ref... - GA15302-PA [Drosophila pseudoobscura], GA15302 [Drosophila pseudoobscura pseudoobscura]	104.0	[0..1]	[183..1]

Back

Predicted Domain #1

Region A:
Residues: [1-183]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADVAEQKNE TPVVEKVAAE EVDAVKKDAV AAEEVAAEKA SITENGGAEE ESVAKENGAA  60
   61 DSSATEPTDA VDGEKASEPT VSFAADKDEK KDEDKKEDSA ADGEDTKKES SEAVLPAVEN 120
  121 GSEEVTNGDS TDAPAIEAVK RKVDEAAAKA DEAVATPEKK AKLDEASTKD EVQNGAEASE 180
  181 VAA

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	1.42
Match:	2j63A
Description:	No description for 2j63A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits