YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|20129551, gi\|...
Organism:	Drosophila melanogaster
Length:	272 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20129551, gi|....

Description	E-value	Query Range	Subject Range
gi\|13384201 - gi\|13384201\|gb\|AAK21311.1\| myosin subfamily XI heavy chain [Petroselinum crispum]	169.0	[0..2]	[269..741]
gi\|7441408, gi\|2... - pir\|\|T14278 myosin-like protein my4 - common sunflower, gi\|2444178\|gb\|AAB71528.1\| unconventional myo...	168.0	[0..2]	[269..741]
MYO8_ARATH - Myosin-8 OS=Arabidopsis thaliana GN=XI-B PE=3 SV=1	166.0	[0..2]	[269..742]
gi\|29170491 - gi\|29170491\|dbj\|BAC66162.1\| myosin XI [Nicotiana tabacum]	165.0	[0..2]	[269..600]
gi\|47848191, gi\|... - gi\|50915880\|ref\|XP_468404.1\| putative myosin subfamily XI heavy chain [Oryza sativa (japonica cultiv...	163.0	[0..1]	[269..759]
gi\|24584525, gi\|... - gb\|AAF44977.1\| hypothetical protein [Drosophila melanogaster], gi\|24584525\|ref\|NP_723942.1\| CG12448...	161.0	[0..1]	[268..19]

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Predicted Domain #1

Region A:
Residues: [1-272]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDFSSGSHQ NTDNFSDCWL ESNSSQDSYF GQSSRLKLAL LDYKQFNAAR TIQCHVRGFL  60
   61 ARSTLKRQID AATIISKWWR GFWVRHSKFS FMQQLLQQRI IQYHHDMATK IQALFRGWMT 120
  121 RQYFQDFQGM KSLRIQYVED MLSSLYRKVH RMRKEHMLPG IYALRESDLL SKIEDLSSTF 180
  181 GYRFHNGRVR AAIAMKRSFI NDRRHEFRKG NTYSKVPYPG PYIENINDLE FTLPKRMTPR 240
  241 LQRTILVYDK AMRDKNVEKV YMNYSTSKFD TI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	28.0
Match:	2dfsA
Description:	No description for 2dfsA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits