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View Structure Prediction Details

Protein: CG4103-PA, FBpp0...
Organism: Drosophila melanogaster
Length: 286 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG4103-PA, FBpp0....

Description E-value Query
Range
Subject
Range
gi|54645689|gb|E... - GA17959-PA [Drosophila pseudoobscura], GA17959 [Drosophila pseudoobscura pseudoobscura]
gi|125987191, gi... - gi|54645689|gb|EAL34427.1| GA17959 [Drosophila pseudoobscura pseudoobscura], gi|125987191|ref|XP_001...
440.0 [0..1] [286..1]
THG1_MOUSE - Probable tRNA(His) guanylyltransferase OS=Mus musculus GN=Thg1l PE=1 SV=1
433.0 [0..1] [248..30]
gi|57085243 - gi|57085243|ref|XP_536453.1| PREDICTED: similar to interphase cyctoplasmic foci protein 45 [Canis fa...
428.0 [0..1] [248..130]
THG1_RAT - Probable tRNA(His) guanylyltransferase OS=Rattus norvegicus GN=Thg1l PE=2 SV=1
428.0 [0..1] [246..30]
gi|109079563 - gi|109079563|ref|XP_001113603.1| PREDICTED: similar to interphase cyctoplasmic foci protein 45 [Maca...
428.0 [0..1] [249..30]
gi|8923514, gi|2... - gi|8923514|ref|NP_060342.1| interphase cyctoplasmic foci protein 45 [Homo sapiens], gi|7020726|dbj|B...
427.0 [0..1] [248..30]
THG1_BOVIN - Probable tRNA(His) guanylyltransferase OS=Bos taurus GN=THG1L PE=2 SV=1
427.0 [0..1] [248..30]
gi|114603135 - gi|114603135|ref|XP_518066.2| PREDICTED: interphase cytoplasmic foci protein 45 [Pan troglodytes]
427.0 [0..1] [248..30]

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Predicted Domain #1
Region A:
Residues: [1-167]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACSRFEYVK SFEQDDSILP NVWIVIRIDG KKFHKFSKTH DFEKPNDENA LNVMNAAATA  60
   61 VMQEFRDIVL AYGQSDEYSF VFRKETAAFK RRSAKLLTYV TSLFSSSYVM QWSKWMNLPL 120
  121 AYAPCFDGRV VLYPSEQNLK DYLSWRQADV HVNNLYNTAF WKLVLEK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [168-286]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLTNQQAEAK LRGTFSADKN ELLFQEFGIN YNNLPAMYRK GTILLRKRVI LGEKSRQAVV  60
   61 PLHEDLISSQ FWKEHTEILG KYVPGTYDAP QTFPRLVEMQ INGKDDNEAE EPQNLAGTS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.488 N/A N/A a.74.1 Cyclin-like
View Download 0.414 N/A N/A a.4.3 ARID-like
View Download 0.350 N/A N/A a.4.5 "Winged helix" DNA-binding domain
View Download 0.339 N/A N/A a.4.3 ARID-like
View Download 0.337 N/A N/A a.24.3 Cytochromes


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle