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View Structure Prediction Details

Protein: Cpr35B-PA
Organism: Drosophila melanogaster
Length: 218 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Cpr35B-PA.

Description E-value Query
Range
Subject
Range
gi|108874073, gi... - gi|157124186|ref|XP_001660354.1| cuticle protein, putative [Aedes aegypti], gi|108874073|gb|EAT38298...
148.0 [0..1] [156..1]
gi|24660811, gi|... - gi|24660811|ref|NP_648208.1| CG7072-PA [Drosophila melanogaster], gi|23093945|gb|AAF50443.2| CG7072-...
147.0 [0..2] [199..40]
gi|112983758, gi... - gi|12862591|dbj|BAB32481.1| cuticle protein [Bombyx mori], gi|112983758|ref|NP_001036866.1| cuticle ...
136.0 [0..1] [141..1]
gi|54641081, gi|... - gi|54641081|gb|EAL29832.1| GA20079-PA [Drosophila pseudoobscura], gi|125980121|ref|XP_001354093.1| G...
135.0 [0..40] [198..23]

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Predicted Domain #1
Region A:
Residues: [1-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQKFFIAFA LLAIAAIRAA PFHGHEHHGH HGGATSHASV HLTSHDDHHE EHHGHHHDHH  60
   61 GHDDHHDSHA EYDFQYGVKD QKTGDVKSQS ESRHGHTVTG HYELIDADGH KRTVHYTADK 120
  121 HKGFEAHVHR EKLHDHHQAE HH

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 25.552842
Match: PF00379.14
Description: No description for PF00379.14 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [143-218]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GHGHSGYEGG HVEFEEHSSQ SGHDYGHGHE EHGHGHGHGH GHGSSSHSYS LKQEHGHGHG  60
   61 HSHGQDHGFE HGHGYH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle