| Protein: | FBpp0310250, RpL7-PA |
| Organism: | Drosophila melanogaster |
| Length: | 252 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0310250, RpL7-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
374.0 | [0..8] | [251..75] |
|
|
368.0 | [0..4] | [251..25] |
|
|
366.0 | [0..2] | [231..252] |
|
|
363.0 | [0..2] | [251..8] |
|
|
360.0 | [0..4] | [251..50] |
|
|
357.0 | [0..6] | [251..3] |
|
Region A: Residues: [1-87] |
1 11 21 31 41 51
| | | | | |
1 MPAPVVKKPA AKKLPAVPES KLKFSKKQIS KRVAESKRRL KKAAVIALRK KENLVRAEKY 60
61 QNEYIKAEQR EIKLRRLAKK RNQFYVP
|
| Detection Method: |  |
| Confidence: | 22.677781 |
| Match: | PF08079.3 |
| Description: | No description for PF08079.3 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.965 | N/A | N/A | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.937 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.926 | N/A | N/A | a.25.3 | Description not found. |
| View | Download | 0.920 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.914 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.906 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.902 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.885 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.871 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.871 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
|
Region A: Residues: [88-252] |
1 11 21 31 41 51
| | | | | |
1 AEAKLAFVVR IRGINKVAPK VRKVLQLFRL RQINNGVFIK LNKATINMLR IAEPYITWGY 60
61 PNLKSVRELI YKRGFVKHNR QRVPITDNFV IERKLRQAHQ IQCVEDLVHE IFTVGPNFKY 120
121 ASNFLWPFKL NTPTGGWRKK ANHYVNGGDF GNREDQINRL LRKMV
|
| Detection Method: | |
| Confidence: | 60.69897 |
| Match: | 1s1iF |
| Description: | Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H. |
Matching Structure (courtesy of the PDB): |
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