YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: FBpp0310419, aust-PA
Organism: Drosophila melanogaster
Length: 216 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0310419, aust-PA.

Description E-value Query
Range
Subject
Range
gi|58377124, gi|... - gi|58377124|ref|XP_309425.2| ENSANGP00000011205 [Anopheles gambiae str. PEST], gi|55244745|gb|EAA051...
259.0 [0..15] [209..120]
gi|125984157|ref... - GA18196-PA [Drosophila pseudoobscura], GA18196 [Drosophila pseudoobscura pseudoobscura]
gi|125984157, gi... - gi|54644160|gb|EAL32902.1| GA18196 [Drosophila pseudoobscura pseudoobscura], gi|125984157|ref|XP_001...
157.0 [0..77] [212..171]
borr-PB - The gene borealin-related is referred to in FlyBase by the symbol Dmel\borr (CG4454, FBgn0032105). I...
gi|220952188 - gi|220952188|gb|ACL88637.1| borr-PB [synthetic construct]
152.0 [0..101] [210..196]
gi|157129058, gi... - gi|157129058|ref|XP_001655256.1| hypothetical protein AaeL_AAEL011321 [Aedes aegypti], gi|108872377|...
141.0 [0..6] [208..104]
gi|110762041 - gi|110762041|ref|XP_001120534.1| PREDICTED: similar to embryonic stem cell-related [Apis mellifera]
66.0 [0..85] [207..138]

Back

Predicted Domain #1
Region A:
Residues: [1-91]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRTKITARR QAQRQKADRE EKVRLSQIKM DSALEKIDEM SKRYKQEVDN QIKVIRGRTD  60
   61 KQLLQMKMPE FLALGFKTFA EFQRAAIKPP T

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [92-216]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TRSLSISRGR TRTPQNALPP RLQAHSVDRA LSGDTMSFVR WPRAGEMVLS KAGSPLAVQM  60
   61 RPDRYADVHI PTRGGVITVK PHKINTVKRE VLMQLDENTL NQVKTLNANL GLIVDMANKL 120
  121 GKLKP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle