YRC Public Data Repository - Protein Structure Prediction

Protein:	CG9582-PA, FBpp0...
Organism:	Drosophila melanogaster
Length:	300 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG9582-PA, FBpp0....

Description	E-value	Query Range	Subject Range
gi\|74006830 - gi\|74006830\|ref\|XP_537947.2\| PREDICTED: similar to ADP/ATP translocase 3 (Adenine nucleotide translo...	278.0	[0..8]	[295..175]
gi\|114597246 - gi\|114597246\|ref\|XP_517556.2\| PREDICTED: solute carrier family 25 (mitochondrial carrier; adenine nu...	275.0	[0..7]	[294..204]
gi\|60466585, gi\|... - gi\|66808853\|ref\|XP_638149.1\| EF-hand domain-containing protein [Dictyostelium discoideum AX4], gi\|60... MCFB_DICDI - Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1	272.0	[0..8]	[296..133]
gi\|49649170 - gi\|49649170\|emb\|CAG81508.1\| YALI0D26147p [Yarrowia lipolytica] gi\|49649170, gi\|... - gi\|50551655\|ref\|XP_503302.1\| YALI0D26147p [Yarrowia lipolytica], gi\|49649170\|emb\|CAG81508.1\| unnamed...	271.0	[0..16]	[295..315]
gi\|68366574 - gi\|68366574\|ref\|XP_694733.1\| PREDICTED: similar to ADP,ATP carrier protein 2 (ADP/ATP translocase 2)...	270.0	[0..8]	[296..17]
gi\|50750910 - gi\|50750910\|ref\|XP_422180.1\| PREDICTED: similar to Solute carrier family 25 member 24, isoform 1 [Ga...	270.0	[0..5]	[295..332]
gi\|91077114 - gi\|91077114\|ref\|XP_970499.1\| PREDICTED: similar to mitochondrial solute carrier [Tribolium castaneum...	270.0	[0..2]	[296..322]
gi\|47227215 - gi\|47227215\|emb\|CAG00577.1\| unnamed protein product [Tetraodon nigroviridis]	270.0	[0..7]	[295..4]
gi\|46249805 - gi\|46249805\|gb\|AAH68561.1\| Solute carrier family 25 (mitochondrial carrier; phosphate carrier), memb...	269.0	[0..5]	[295..186]

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Predicted Domain #1

Region A:
Residues: [1-300]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATRSEETVR SLAHWQFLAG GLSGFIEIIC FHPLDVVKTR MQIQGAHPFG GEVVYTCPLD  60
   61 AIVKIYRYEG LSSLWKGIVP PICVETPKRG GKFLMYESLK PYFQFGAPQP TPLTHAMSGS 120
  121 MAAILESFLV NPFEVVKITQ QAHRGKRLKT LSVVKYIIKH DGYGIKGLYR GITALVARNA 180
  181 VFHFGFFGFY NALKDIVPSP EDKTYNILRK VIIAGLASSL ACVMSVTLDM AKCRIQGPQP 240
  241 VKGEVKYQWT ISTIKSTFKE EGFRSLFKGL GAMILRVGPG GAMLLVTYEY LFEFLKSQNI 300
  301

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	71.154902
Match:	1okcA
Description:	structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits