YRC Public Data Repository - Protein Structure Prediction

Protein:	FBpp0303870, FBp...
Organism:	Drosophila melanogaster
Length:	275 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0303870, FBp....

Description	E-value	Query Range	Subject Range
gi\|2781421 - gi\|2781421\|gb\|AAB96894.1\| rolling stone [Drosophila melanogaster]	350.0	[0..1]	[275..1]
gi\|58391445, gi\|... - gi\|58391445\|ref\|XP_318601.2\| ENSANGP00000020959 [Anopheles gambiae str. PEST], gi\|55235743\|gb\|EAA144...	307.0	[0..7]	[264..5]
gi\|54644146, gi\|... - gi\|54644146\|gb\|EAL32888.1\| GA12046-PA [Drosophila pseudoobscura], gi\|125984129\|ref\|XP_001355829.1\| G...	286.0	[0..8]	[261..10]
gi\|108872979, gi... - gi\|157127229\|ref\|XP_001654877.1\| hypothetical protein AaeL_AAEL010778 [Aedes aegypti], gi\|157127227\|...	266.0	[0..5]	[264..3]

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Predicted Domain #1

Region A:
Residues: [1-275]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLFDDFCKS FNKELQRANF GFAYNRVHLF YRSQWQKDEI NTIYLLYRWI WALFFLGVYI  60
   61 MCVIVQFCDG KFFIYMTNWG FGLCTITMLI SAVQVTCWHF DVRSTRSLVQ ESGHKAETSR 120
  121 GLKIYWWLYN MTLSLALIIS TVYWVFLHGK MNKPMRFPAI SIITHGMNSV MMLIDFLVIA 180
  181 FPLRILHMVY GMSLAIFFFL FTLIYHLCGG TDEFGNHYVY PILDWNNPNR CMVTFVGIFL 240
  241 LIMCYWVLLF GLYKLKRMFN RAFSVVWSPH AVGLI

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits