YRC Public Data Repository - Protein Structure Prediction

Protein:	Dh31-PA
Organism:	Drosophila melanogaster
Length:	116 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Dh31-PA.

Description	E-value	Query Range	Subject Range
gi\|125986999, gi... - gi\|54645593\|gb\|EAL34331.1\| GA12042 [Drosophila pseudoobscura pseudoobscura], gi\|125986999\|ref\|XP_001... gi\|195156257, gi... - gi\|195156257\|ref\|XP_002019017.1\| GL25648 [Drosophila persimilis], gi\|194115170\|gb\|EDW37213.1\| GL2564... gi\|125986999\|ref... - GA12042-PA [Drosophila pseudoobscura], GA12042 [Drosophila pseudoobscura pseudoobscura]	185.0	[0..1]	[116..1]
Dh31-PC - The gene Diuretic hormone 31 is referred to in FlyBase by the symbol Dmel\Dh31 (CG13094, FBgn0032048...	156.0	[0..1]	[116..1]
gi\|116116482, gi... - gi\|118794830\|ref\|XP_321755.2\| ENSANGP00000017468 [Anopheles gambiae str. PEST], gi\|116116482\|gb\|EAA0...	138.0	[0..9]	[113..14]
gi\|108875957, gi... - gi\|157117647\|ref\|XP_001658868.1\| hypothetical protein AaeL_AAEL008070 [Aedes aegypti], gi\|108875957\|...	125.0	[0..46]	[111..41]
DIUX_DIPPU - Diuretic hormone class 2 OS=Diploptera punctata PE=1 SV=1 DIUX_APIME - Diuretic hormone class 2 OS=Apis mellifera PE=1 SV=1 DIUX_RHOPR - Diuretic hormone class 2 OS=Rhodnius prolixus PE=1 SV=1	53.0	[0..77]	[106..2]

Back

Predicted Domain #1

Region A:
Residues: [1-116]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNRCACFAL AFLLFCLLAI SSIEAAPMPS QSNGGYGGAG YNELEEVPDD LLMELMTRFG  60
   61 RTIIRARNDL ENSKRTVDFG LARGYSGTQE AKHRMGLAAA NFAGGPGRRR RSETDV

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

		MCM Score	SCOP Match	SCOP Description
View	Download	0.569	a.49.1	C-terminal domain of B transposition protein
View	Download	0.494	a.65.1	Annexin
View	Download	0.377	a.24.17	Group V grass pollen allergen
View	Download	0.368	a.8.2	Plasmid maintenance system epsilon/zeta, antidote epsilon subunit
View	Download	0.355	a.4.8	Ribosomal protein S18

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits