YRC Public Data Repository - Protein Structure Prediction

Protein:	FBpp0309216, fu1...
Organism:	Drosophila melanogaster
Length:	271 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0309216, fu1....

Description	E-value	Query Range	Subject Range
gi\|17861834 - gi\|17861834\|gb\|AAL39394.1\| GM02347p [Drosophila melanogaster]	221.0	[0..1]	[271..1]
gi\|125987007\|ref... - GA14576-PA [Drosophila pseudoobscura], GA14576 [Drosophila pseudoobscura pseudoobscura] gi\|125987007, gi... - gi\|54645597\|gb\|EAL34335.1\| GA14576 [Drosophila pseudoobscura pseudoobscura], gi\|125987007\|ref\|XP_001...	212.0	[0..1]	[271..1]
gi\|27362190, gi\|... - gi\|27365990\|ref\|NP_761518.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio vulnificus CMCP6...	189.0	[0..25]	[271..2]
gi\|116131234, gi... - gi\|118780346\|ref\|XP_559898.2\| ENSANGP00000027495 [Anopheles gambiae str. PEST], gi\|116131234\|gb\|EAL4...	186.0	[0..2]	[270..1]
gi\|52424565, gi\|... - gi\|52424565\|ref\|YP_087702.1\| PlsC protein [Mannheimia succiniciproducens MBEL55E], gi\|52306617\|gb\|AA...	186.0	[0..27]	[264..4]
gi\|37679745, gi\|... - gi\|37679745\|ref\|NP_934354.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio vulnificus YJ016...	185.0	[0..37]	[271..1]
gi\|226196670, gi... - gi\|226196670\|ref\|ZP_03792250.1\| acyltransferase family protein [Burkholderia pseudomallei Pakistan 9... gi\|237810902, gi... - gi\|237810902\|ref\|YP_002895353.1\| phospholipid/glycerol acyltransferase [Burkholderia pseudomallei MS... gi\|134248820, gi... - gi\|134279620\|ref\|ZP_01766332.1\| acyltransferase family protein [Burkholderia pseudomallei 305], gi\|1... gi\|126220714, gi... - gi\|67739085\|ref\|ZP_00489691.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Burkholderia... gi\|217397423, gi... - gi\|217420119\|ref\|ZP_03451625.1\| acyltransferase family protein [Burkholderia pseudomallei 576], gi\|2... gi\|254258571, gi... - gi\|90292752\|ref\|ZP_01212360.1\| hypothetical protein Bpse17_02002601 [Burkholderia pseudomallei 1710a... gi\|100063985, gi... - gi\|67757102\|ref\|ZP_00495980.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Burkholderia... gi\|167002701, gi... - gi\|243061640\|gb\|EES43826.1\| putative 1-acyl-sn-glycerol-3-phosphate acyltransferase [Burkholderia ma... gi\|84521852, gi\|... - gi\|84521852\|ref\|ZP_01008988.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Burkholderia... gi\|254177090, gi... - gi\|254177090\|ref\|ZP_04883747.1\| putative 1-acyl-sn-glycerol-3-phosphate acyltransferase [Burkholderi... gi\|85066591 - gi\|85066591\|ref\|ZP_01027444.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Burkholderia... gi\|254196604, gi... - gi\|67759805\|ref\|ZP_00498535.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Burkholderia... gi\|76578299, gi\|... - gi\|76808846\|ref\|YP_332292.1\| phospholipid and glycerol acyltransferase [Burkholderia pseudomallei 17... gi\|254360237, gi... - gi\|87313947\|ref\|ZP_01095009.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Burkholderia... gi\|83625912, gi\|... - gi\|83625912\|ref\|ZP_00936140.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Burkholderia... gi\|82535691, gi\|... - gi\|90662012\|ref\|ZP_01249849.1\| hypothetical protein Bpse110_02006303 [Burkholderia pseudomallei 1106... gi\|100916061, gi... - gi\|67636645\|ref\|ZP_00435589.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Burkholderia... gi\|100232211, gi... - gi\|83676950\|ref\|ZP_00938715.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Burkholderia... gi\|238522398, gi... - gi\|67641458\|ref\|ZP_00440236.1\| phospholipid/glycerol acyltransferase [Burkholderia mallei GB8 horse ... gi\|53718308, gi\|... - gi\|53718308\|ref\|YP_107294.1\| putative acyltransferase [Burkholderia pseudomallei K96243], gi\|5220872... gi\|147745247, gi... - gi\|83620973\|ref\|ZP_00931387.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Burkholderia... gi\|52428458, gi\|... - gi\|53725035\|ref\|YP_102050.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative [Burkholderia ... gi\|67670401, gi\|... - gi\|99908970\|ref\|ZP_01316568.1\| hypothetical protein Bpse1_03004081 [Burkholderia pseudomallei 1655],... gi\|67647706, gi\|... - gi\|67647706\|ref\|ZP_00445945.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Burkholderia... gi\|82532708, gi\|... - gi\|82532708\|ref\|ZP_00891918.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Burkholderia... gi\|124384491, gi... - gi\|124384491\|ref\|YP_001028310.1\| putative 1-acyl-sn-glycerol-3-phosphate acyltransferase [Burkholder...	184.0	[0..18]	[269..1]
gi\|167617964 - gi\|167617964\|ref\|ZP_02386595.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative [Burkholder... gi\|83721584, gi\|... - gi\|83721584\|ref\|YP_441139.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative [Burkholderia ...	182.0	[0..18]	[269..1]
gi\|12720314, gi\|... - gi\|15601968\|ref\|NP_245040.1\| hypothetical protein PM0103 [Pasteurella multocida subsp. multocida str...	182.0	[0..27]	[266..4]
gi\|55249755, gi\|... - gi\|55249755\|gb\|AAH85852.1\| 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acy...	182.0	[0..2]	[259..7]

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Predicted Domain #1

Region A:
Residues: [1-73]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACTCEVIGL ACVVALILSA TAKAPYQMRM FFIFFGAGLI VFLCVPFMIL RPRDYRNALF  60
   61 PSWCFRQLCR LVG

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [74-271]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ITMEVRGLEN VRKDHGAVVI MNHQSAVDLC VLAYLWPVIG RATVVSKKEV LYIPFFGIGA  60
   61 WLWGTLYIDR SRKTDSINSL QKEAKAIQER NCKLLLFPEG TRNSKDSLLP FKKGSFHIAL 120
  121 QGKSPVQPVV ISKYSFMDDE KKTFRPGHAL IHILPEVSTE KYKREDVQLL IDECQSIMQT 180
  181 EYTKLSKEGQ ALSSKKQA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	7.39794
Match:	1iuqA
Description:	The 1.55 A Crystal Structure of Glycerol-3-Phosphate Acyltransferase
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits