YRC Public Data Repository - Protein Structure Prediction

Protein:	CG8498-PA, FBpp0...
Organism:	Drosophila melanogaster
Length:	90 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8498-PA, FBpp0....

Description	E-value	Query Range	Subject Range
gi\|73949054 - gi\|73949054\|ref\|XP_848899.1\| PREDICTED: similar to Acyl-CoA-binding protein (ACBP) (Diazepam binding...	132.0	[0..1]	[88..211]
gi\|113549007, gi... - gi\|50901174\|ref\|XP_463020.1\| putative Acyl-CoA-binding protein [Oryza sativa (japonica cultivar-grou...	127.0	[0..1]	[88..1]
gi\|37654308, gi\|... - gi\|37654308\|gb\|AAQ96259.1\| LRRGT00046 [Rattus norvegicus], gi\|109498524\|ref\|XP_001054001.1\| PREDICTE...	124.0	[0..4]	[89..102]
gi\|148707856, gi... - gi\|83921595\|ref\|NP_001033088.1\| diazepam binding inhibitor isoform 1 [Mus musculus], gi\|67511482\|emb...	122.0	[0..3]	[88..50]
gi\|12052810 - gi\|12052810\|emb\|CAB66577.1\| hypothetical protein [Homo sapiens]	121.0	[0..2]	[90..38]
gi\|35187458 - gi\|35187458\|gb\|AAQ84320.1\| acyl-CoA-binding protein [Gossypium barbadense]	120.0	[0..1]	[89..1]
gi\|73746605 - gi\|73746605\|gb\|AAZ82211.1\| diazepam-binding protein [Nomascus gabriellae]	120.0	[0..4]	[88..20]
ACBD5_XENTR - Acyl-CoA-binding domain-containing protein 5 OS=Xenopus tropicalis GN=acbd5 PE=2 SV=1	119.0	[0..4]	[85..9]
gi\|114580585 - gi\|114580585\|ref\|XP_515759.2\| PREDICTED: diazepam binding inhibitor isoform 3 [Pan troglodytes] DBI - diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)	119.0	[0..1]	[88..1]

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Predicted Domain #1

Region A:
Residues: [1-90]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSELQEFNQA AEDVKNLNTT PGDNDLLELY SLYKQATVGD CNTDKPGFLD FKGKAKWEAW  60
   61 NNRKGMSNTD AQAAYITKVK ALIAAVGLKS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	27.69897
Match:	2fj9A
Description:	No description for 2fj9A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits