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View Structure Prediction Details

Protein: Acp1-PA
Organism: Drosophila melanogaster
Length: 135 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Acp1-PA.

Description E-value Query
Range
Subject
Range
gi|220956646, gi... - gi|220956646|gb|ACL90866.1| CG31904-PB [synthetic construct], gi|220947148|gb|ACL86117.1| CG31904-PB...
CG31904-PB, CG31... - This gene is referred to in FlyBase by the symbol Dmel\CG31904 (CG31904, FBgn0260479). It is a prote...
149.0 [0..3] [120..224]
gi|125985403|ref... - GA20185-PA [Drosophila pseudoobscura], GA20185 [Drosophila pseudoobscura pseudoobscura]
gi|125985403, gi... - gi|54644789|gb|EAL33529.1| GA20185 [Drosophila pseudoobscura pseudoobscura], gi|125985403|ref|XP_001...
gi|195147314, gi... - gi|195147314|ref|XP_002014625.1| GL18853 [Drosophila persimilis], gi|194106578|gb|EDW28621.1| GL1885...
76.0 [0..1] [135..1]

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Predicted Domain #1
Region A:
Residues: [1-135]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFAVAVIFT LALAMGVQSS VIPLLSQVAG HGLSYTAVSG PAVVASPWAV PAAHWPAAVN  60
   61 VASWPPAAIH AAAPAVLAAP APAVVAAHAP SVVVAPVAHS GVYTAQTRGA IHTAPLAGHI 120
  121 QSVASINAAP APGTL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.340 a.24.17 Group V grass pollen allergen
View Download 0.324 a.118.9 ENTH/VHS domain
View Download 0.323 d.95.2 Homing endonucleases
View Download 0.288 b.101.1 Ribonuclease domain of colicin E3
View Download 0.286 d.129.1 TATA-box binding protein-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle