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View Structure Prediction Details

Protein: gi|17945434, gi|...
Organism: Drosophila melanogaster
Length: 233 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|17945434, gi|....

Description E-value Query
Range
Subject
Range
Pvf3-PA - The gene PDGF- and VEGF-related factor 3 is referred to in FlyBase by the symbol Dmel\Pvf3 (CG34378,...
315.0 [0..1] [229..1]

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Predicted Domain #1
Region A:
Residues: [1-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLNTLRLAL IFLSFVRLEA QANVQNNGWQ KVLPDDFRRE RDKSSTRTRR NPQEELRLRH  60
   61 EQHHLRLQQH QMAWELDLQR QLQQHLQEQQ SEQSEQQSRP VRHHQHKSHT KELAKKPIRR 120
  121 APSFGDDKAK MVQKRRLHYN EYDNEDLELH TIETGDQGTF TPRQWQQIEI AHRRQKEQHQ 180
  181 LQLLAQRQQQ RQLLTTTTAT ATAMAMATTS KATEPNDAKS EDNDVSESKG DSI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle