YRC Public Data Repository - Protein Structure Prediction

Protein:	CG13773-PA
Organism:	Drosophila melanogaster
Length:	253 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG13773-PA.

Description	E-value	Query Range	Subject Range
gi\|109067243 - gi\|109067243\|ref\|XP_001103523.1\| PREDICTED: similar to TWIST neighbor [Macaca mulatta]	260.0	[0..15]	[236..30]
TWISTNB - TWIST neighbor	260.0	[0..15]	[236..30]
gi\|114612253 - gi\|114612253\|ref\|XP_519541.2\| PREDICTED: TWIST neighbor [Pan troglodytes]	258.0	[0..15]	[236..30]
gi\|82965335 - gi\|82965335\|ref\|XP_922547.1\| PREDICTED: hypothetical protein [Mus musculus]	256.0	[0..15]	[235..30]
gi\|109479263, gi... - gi\|109479263\|ref\|XP_001076417.1\| PREDICTED: similar to TWIST neighbor [Rattus norvegicus], gi\|109478...	248.0	[0..15]	[235..30]
gi\|44983094 - gi\|44983094\|gb\|AAS52297.1\| ADR377Wp [Ashbya gossypii ATCC 10895] gi\|45188250, gi\|... - gi\|45188250\|ref\|NP_984473.1\| ADR377Wp [Ashbya gossypii ATCC 10895], gi\|44983094\|gb\|AAS52297.1\| ADR37...	233.0	[0..6]	[225..14]
gi\|73976470 - gi\|73976470\|ref\|XP_853598.1\| PREDICTED: similar to TWIST neighbor [Canis familiaris]	229.0	[0..15]	[236..108]

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Predicted Domain #1

Region A:
Residues: [1-253]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKILQKYIK FSVKELENYA SSPESCVRCI TTDMHLAMGP YGMANFKHAL HELLIRTKVG  60
   61 FYDSGLDGIV LGIKNIKVLG QTAGLRADDP TMHLVINADF YVFRPKAGAI LSGVVRHISR 120
  121 HHVSAVIYRV FNTSIRFTNQ SASREDIAMD QEIKIRIKNF DISNLMPYIE GELLLENGEA 180
  181 PKNKSIKFGS PPPEEKEVKK EDPDEMLDAL ITEIKKEPEF TPRKKTSTKR KNGENGDTTK 240
  241 TKKVKKEIKS EPI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	14.522879
Match:	2ckzB
Description:	No description for 2ckzB was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits