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View Structure Prediction Details

Protein: tomb-PA
Organism: Drosophila melanogaster
Length: 243 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tomb-PA.

Description E-value Query
Range
Subject
Range
TCX5_ARATH - Protein tesmin/TSO1-like CXC 5 OS=Arabidopsis thaliana GN=TCX5 PE=1 SV=1
170.0 [0..5] [176..181]
gi|20804673, gi|... - gi|50902016|ref|XP_463441.1| P0512C01.13 [Oryza sativa (japonica cultivar-group)], dbj|BAB92361.1| P...
150.0 [0..3] [174..137]

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Predicted Domain #1
Region A:
Residues: [1-115]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSPKKRSVD KADGKKGKGQ GAGGVKGCCC KRSQCIKNYC DCYQSMAICT KFCRCVGCRN  60
   61 TEVRELVDPN SVAKNSSAVK RQKAAAMSAK AAAAAAKAGI DVQGKALQVA ASTLA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [116-243]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPGKALMTPP KYTLVAGKPP MASSHINPIP ISRPIATAAT PARAVKQPAE PPMPVNLIIP  60
   61 VRHDDRRDRN LFVQPVNAAL LECMLIQATE AEQLGLNELQ VCQLVLEEFM RGYKNILEKI 120
  121 CEYSKDYY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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