YRC Public Data Repository - Protein Structure Prediction

Protein:	FBpp0307167, CG3...
Organism:	Drosophila melanogaster
Length:	142 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0307167, CG3....

Description	E-value	Query Range	Subject Range
gi\|38048633 - gi\|38048633\|gb\|AAR10219.1\| similar to Drosophila melanogaster CG3214 [Drosophila yakuba]	203.0	[0..1]	[142..1]
gi\|125984440, gi... - gi\|54644302\|gb\|EAL33043.1\| GA16708 [Drosophila pseudoobscura pseudoobscura], gi\|125984440\|ref\|XP_001... gi\|194103341, gi... - gi\|195161370\|ref\|XP_002021541.1\| GL26457 [Drosophila persimilis], gi\|194103341\|gb\|EDW25384.1\| GL2645... gi\|125984440\|ref... - GA16708-PA [Drosophila pseudoobscura], GA16708 [Drosophila pseudoobscura pseudoobscura]	202.0	[0..1]	[142..1]
gi\|108883517, gi... - gi\|157115311\|ref\|XP_001658194.1\| NADH:ubiquinone dehydrogenase, putative [Aedes aegypti], gi\|1088835...	198.0	[0..1]	[139..1]
gi\|58386434, gi\|... - gi\|58386434\|ref\|XP_314752.2\| ENSANGP00000013247 [Anopheles gambiae str. PEST], gi\|55239841\|gb\|EAA101...	193.0	[0..1]	[139..1]
gi\|91085133 - gi\|91085133\|ref\|XP_969714.1\| PREDICTED: similar to AGAP008653-PA [Tribolium castaneum]	190.0	[0..1]	[139..1]
CE25630 - WBGene00022380 status:Partially_confirmed	189.0	[0..4]	[142..47]
gi\|157759143 - gi\|157759143\|ref\|XP_001671915.1\| Hypothetical protein CBG13913 [Caenorhabditis briggsae AF16] gi\|39585950, gi\|... - gi\|39585950\|emb\|CAE68239.1\| Hypothetical protein CBG13913 [Caenorhabditis briggsae], gi\|187028267\|em...	184.0	[0..4]	[142..10]
NDUAC_BOVIN - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Bos taurus GN=NDUFA12 PE=1 SV=1 gi\|222092839, gi... - gi\|223633908\|ref\|NP_001138660.1\| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 [Ovis aries]...	184.0	[0..10]	[141..7]
gi\|57096775 - gi\|57096775\|ref\|XP_532652.1\| PREDICTED: similar to 13kDa differentiation-associated protein [Canis f...	183.0	[0..10]	[141..7]

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Predicted Domain #1

Region A:
Residues: [1-142]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKFLGINRL TKLFQMVREA GGLKQAYLKL YRNDDLKIGT LVGIDKYGNK YFENPYYFYG  60
   61 RNRWIEFAPH VNMDYDGSMI PAEWYGWMHY KTDLPPIRDG CRPKYKWIAD HSENLSGTKE 120
  121 AYYPYSTTPN KVEAWEPKAK KQ

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	60.677781
Match:	PF05071.7
Description:	No description for PF05071.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits