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View Structure Prediction Details

Protein: halo-PA
Organism: Drosophila melanogaster
Length: 150 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for halo-PA.

Description E-value Query
Range
Subject
Range
gi|54645360, gi|... - gi|54645360|gb|EAL34100.1| GA20343-PA [Drosophila pseudoobscura], gi|125986541|ref|XP_001357034.1| G...
170.0 [0..39] [150..1]
gi|17945573 - gi|17945573|gb|AAL48838.1| RE26062p [Drosophila melanogaster]
124.0 [0..42] [118..1]
gi|33329019 - gi|33329019|gb|AAQ09916.1| CG14112 [Drosophila yakuba]
101.0 [0..62] [136..29]

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Predicted Domain #1
Region A:
Residues: [1-150]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGLKYQDNP TSGSTALWTL KANRSLRSTH IPSKSVGIYS IMAELLFPQL ERPLPSLPSL  60
   61 HYTLFAYREE LRRRDAPFMK MSTIKLHLTD NLILQTIKNI RQYDTIEIMN LNQEINFKRR 120
  121 LTKQMRKVRK LEKLGLHIDP RKLNEDGKWH 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 45.045757
Match: PF05306.2
Description: No description for PF05306.2 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.472 N/A N/A a.25.1 Ferritin-like
View Download 0.379 N/A N/A a.1.1 Globin-like
View Download 0.379 N/A N/A a.1.1 Globin-like
View Download 0.356 N/A N/A a.29.9 Description not found.
View Download 0.336 N/A N/A d.58.57 Description not found.
View Download 0.312 N/A N/A a.47.2 t-snare proteins
View Download 0.312 N/A N/A a.47.2 t-snare proteins
View Download 0.285 N/A N/A a.133.1 Phospholipase A2, PLA2
View Download 0.266 N/A N/A a.26.1 4-helical cytokines
View Download 0.238 N/A N/A a.74.1 Cyclin-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle