| Protein: | MK_RAT |
| Organism: | Rattus norvegicus |
| Length: | 140 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MK_RAT.
| Description | E-value | Query Range |
Subject Range |
|
|
181.0 | [0..30] | [125..33] |
|
|
179.0 | [0..30] | [138..33] |
|
|
171.0 | [0..4] | [127..2] |
|
|
170.0 | [0..31] | [123..61] |
|
|
170.0 | [0..2] | [129..3] |
|
|
169.0 | [0..3] | [140..2] |
|
|
169.0 | [0..30] | [125..33] |
|
Region A: Residues: [1-78] |
1 11 21 31 41 51
| | | | | |
1 MQHRSFFLLA LVALLAVTTA VAKKKDKVKK GSECSEWTWG PCTPSSKDCG MGFREGTCGA 60
61 QTQRIHCKVP CNWKKEFG
|
| Detection Method: |  |
| Confidence: | 4.17 |
| Match: | 1mknA |
| Description: | Midkine, a heparin-binding growth factor, N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [79-140] |
1 11 21 31 41 51
| | | | | |
1 ADCKYKFESW GACDGSTGTK ARQGTLKKAR YNAQCQETIR VTKPCTSKTK SKAKAKKGKG 60
61 KD
|
| Detection Method: | |
| Confidence: | 36.0 |
| Match: | PF01091.9 |
| Description: | No description for PF01091.9 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
