YRC Public Data Repository - Protein Structure Prediction

Protein:	MMGT1_RAT
Organism:	Rattus norvegicus
Length:	131 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MMGT1_RAT.

Description	E-value	Query Range	Subject Range
gi\|76622485 - gi\|76622485\|ref\|XP_593383.2\| PREDICTED: similar to transmembrane protein 32 [Bos taurus]	211.0	[0..1]	[131..1]
gi\|149755733 - gi\|149755733\|ref\|XP_001490764.1\| PREDICTED: similar to transmembrane protein 32 [Equus caballus] gi\|109132382 - gi\|109132382\|ref\|XP_001101253.1\| PREDICTED: similar to transmembrane protein 32 [Macaca mulatta] tr\|U3KP42\|U3KP42... - Uncharacterized protein OS=Oryctolagus cuniculus GN=MMGT1 PE=4 SV=1 gi\|119922849 - gi\|119922849\|ref\|XP_001250547.1\| PREDICTED: hypothetical protein LOC617557 isoform 2 [Bos taurus] CCDS14653.1_1 - null	198.0	[0..1]	[131..1]
gi\|117646322 - gi\|117646322\|emb\|CAL38628.1\| hypothetical protein [synthetic construct] MMGT1 - membrane magnesium transporter 1 gi\|114690299 - gi\|114690299\|ref\|XP_529222.2\| PREDICTED: transmembrane protein 32 [Pan troglodytes]	197.0	[0..1]	[131..1]
MMGT1_PONAB - Membrane magnesium transporter 1 OS=Pongo abelii GN=MMGT1 PE=2 SV=1 TMM32_PONPY - Transmembrane protein 32 precursor - Pongo pygmaeus (Orangutan)	194.0	[0..1]	[131..1]
gi\|74009006 - gi\|74009006\|ref\|XP_854751.1\| PREDICTED: similar to transmembrane protein 32 [Canis familiaris]	193.0	[0..1]	[131..1]
gi\|50745752 - gi\|50745752\|ref\|XP_420228.1\| PREDICTED: similar to Transmembrane protein 32 [Gallus gallus]	178.0	[0..2]	[131..3]
MMGT1_DANRE - Membrane magnesium transporter 1 OS=Danio rerio GN=mmgt1 PE=2 SV=1	174.0	[0..1]	[129..1]
MMGT2_MOUSE - Membrane magnesium transporter 2 OS=Mus musculus GN=Mmgt2 PE=2 SV=1	172.0	[0..1]	[123..1]

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Predicted Domain #1

Region A:
Residues: [1-131]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPSLWKGLV GVGLFALAHA AFSAAQHRSY MRLTEKEDES LPIDIVLQTL LAFAVTCYGI  60
   61 VHIAGEFKDM DATSELKNKT FDTLRNHPSF YVFNHRGRVL FRPSDATNSS NLDALSSNTS 120
  121 LKLRKFDSLR R

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits