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View Structure Prediction Details

Protein: AIF1_RAT
Organism: Rattus norvegicus
Length: 147 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AIF1_RAT.

Description E-value Query
Range
Subject
Range
gi|50748592 - gi|50748592|ref|XP_421316.1| PREDICTED: similar to calmodulin 1; Calmodulin 1 (phosphorylase kinase,...
169.0 [0..39] [145..512]
gi|94471603 - gi|94471603|gb|ABF21069.1| mitochondrial calcium sensor cameleon 4mtD3cpv [synthetic construct]
161.0 [0..14] [145..339]
gi|76628526 - gi|76628526|ref|XP_874377.1| PREDICTED: similar to calmodulin 1 [Bos taurus]
156.0 [0..39] [145..77]
gi|114677917 - gi|114677917|ref|XP_512771.2| PREDICTED: similar to calmodulin [Pan troglodytes]
156.0 [0..32] [145..116]

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Predicted Domain #1
Region A:
Residues: [1-147]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQSKDLQGG KAFGLLKAQQ EERLDGINKH FLDDPKYSSD EDLQSKLEAF KTKYMEFDLN  60
   61 GNGDIDIMSL KRMLEKLGVP KTHLELKKLI REVSSGSEET FSYSDFLRMM LGKRSAILRM 120
  121 ILMYEEKNKE HQKPTGPPAK KAISELP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.0
Match: 1wy9A
Description: Crystal structure of microglia-specific protein, Iba1
Matching Structure (courtesy of the PDB):

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