YRC Public Data Repository - Protein Structure Prediction

Protein:	BPNT1_RAT
Organism:	Rattus norvegicus
Length:	308 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BPNT1_RAT.

Description	E-value	Query Range	Subject Range
gi\|145564939, gi... - gi\|77815058\|ref\|ZP_00814301.1\| Inositol-1(or 4)-monophosphatase [Shewanella putrefaciens CN-32], gi\|... gi\|124508941, gi... - gi\|124547819\|ref\|ZP_01706644.1\| inositol monophosphatase [Shewanella putrefaciens 200], gi\|124508941... gi\|120598673, gi... - gi\|120598673\|ref\|YP_963247.1\| inositol-phosphate phosphatase [Shewanella sp. W3-18-1], gi\|120558766\|...	274.0	[0..8]	[306..1]
gi\|160875618, gi... - gi\|160875618\|ref\|YP_001554934.1\| inositol-phosphate phosphatase [Shewanella baltica OS195], gi\|16086... gi\|151365528, gi... - gi\|153000910\|ref\|YP_001366591.1\| inositol-phosphate phosphatase [Shewanella baltica OS185], gi\|15136... gi\|217973133, gi... - gi\|217973133\|ref\|YP_002357884.1\| Inositol-phosphate phosphatase [Shewanella baltica OS223], gi\|21749... gi\|68518682, gi\|... - gi\|68543638\|ref\|ZP_00583336.1\| Inositol-1(or 4)-monophosphatase [Shewanella baltica OS155], gi\|68518...	273.0	[0..8]	[306..1]
gi\|78688379, gi\|... - gi\|78688379\|ref\|ZP_00853076.1\| Inositol-1(or 4)-monophosphatase [Shewanella sp. ANA-3], gi\|78503883\|... gi\|113884757, gi... - gi\|82496763\|ref\|ZP_00882327.1\| Inositol-1(or 4)-monophosphatase [Shewanella sp. MR-4], gi\|82405172\|g...	273.0	[0..8]	[306..1]
gi\|113888756, gi... - gi\|78692445\|ref\|ZP_00856968.1\| Inositol-1(or 4)-monophosphatase [Shewanella sp. MR-7], gi\|78508153\|g...	272.0	[0..8]	[306..1]
gi\|119766926, gi... - gi\|68547392\|ref\|ZP_00586929.1\| Inositol-1(or 4)-monophosphatase [Shewanella amazonensis SB2B], gi\|68...	270.0	[0..8]	[306..1]
gi\|24348211, gi\|... - gi\|24373813\|ref\|NP_717856.1\| extragenic suppressor protein SuhB [Shewanella oneidensis MR-1], gi\|243... SO2260 - extragenic suppressor protein SuhB	270.0	[0..8]	[306..1]
gi\|77359290, gi\|... - gi\|77359290\|ref\|YP_338865.1\| inositol-1-monophosphatase [Pseudoalteromonas haloplanktis TAC125], gi\|...	270.0	[0..8]	[307..1]
gi\|85059750, gi\|... - gi\|85059750\|ref\|YP_455452.1\| inositol monophosphatase [Sodalis glossinidius str. 'morsitans'], gi\|84...	268.0	[0..8]	[306..1]
gi\|37197678, gi\|... - gi\|37678936\|ref\|NP_933545.1\| inositol monophosphate family protein [Vibrio vulnificus YJ016], gi\|371...	267.0	[0..5]	[307..20]
gi\|71146815, gi\|... - gi\|71281075\|ref\|YP_267871.1\| inositol-1-monophosphatase [Colwellia psychrerythraea 34H], gi\|71146815...	266.0	[0..8]	[306..1]

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Predicted Domain #1

Region A:
Residues: [1-308]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSHNVLMR LVASAYSIAQ KAGTIVRCVI AEGDLGIVQK TSATDLQTKA DRMVQMSICS  60
   61 SLSRKFPKLT IIGEEDLPPG EVDQELIEDG QSEEILKQPC PSQYSAIKEE DLVVWVDPVD 120
  121 GTKEYTEGLL DNVTVLIGIA YEGKAIAGII NQPYYNYQAG PDAVLGRTIW GVLGLGAFGF 180
  181 QLKEAPAGKH IITTTRSHSN KLVTDCIAAM NPDNVLRVGG AGNKIIQLIE GKASAYVFAS 240
  241 PGCKKWDTCA PEVILHAVGG KLTDIHGNPL QYDKEVKHMN SAGVLAALRN YEYYASRVPE 300
  301 SVKSALIP

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	65.69897
Match:	1jp4A
Description:	PIPase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
inositol or phosphatidylinositol phosphatase activity	4.76894910345925	bayes_pls_golite062009
phosphatase activity	3.75052568894637	bayes_pls_golite062009
phosphoric ester hydrolase activity	3.56413066315674	bayes_pls_golite062009
hydrolase activity, acting on ester bonds	2.61454888636352	bayes_pls_golite062009
catalytic activity	2.13229228332707	bayes_pls_golite062009
3'(2'),5'-bisphosphate nucleotidase activity	1.47057191917686	bayes_pls_golite062009
binding	0.890627780120238	bayes_pls_golite062009
carbohydrate phosphatase activity	0.77224509118825	bayes_pls_golite062009
fructose 1,6-bisphosphate 1-phosphatase activity	0.447635684330569	bayes_pls_golite062009
nucleotidase activity	0.335234714648046	bayes_pls_golite062009
protein binding	0.286223098418614	bayes_pls_golite062009
inositol-1(or 4)-monophosphatase activity	0.215508735160093	bayes_pls_golite062009
hydrolase activity	0.06056335004637	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: