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View Structure Prediction Details

Protein: DEF2_RAT
Organism: Rattus norvegicus
Length: 94 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DEF2_RAT.

Description E-value Query
Range
Subject
Range
DEF7_PANTR - Defensin-7 OS=Pan troglodytes GN=DEFA7 PE=3 SV=1
154.0 [0..1] [93..1]
gi|113420279 - gi|113420279|ref|XP_001127901.1| PREDICTED: similar to Neutrophil defensin 4 precursor (HNP-4) (HP-4...
151.0 [0..1] [93..271]
gi|57491015, gi|... - gi|74136397|ref|NP_001028095.1| alpha-defensin 4, corticostatin [Macaca mulatta], gi|57491015|gb|AAW...
139.0 [0..1] [94..1]
gi|58429942, gi|... - gi|58429942|gb|AAW78346.1| defensin alpha 2 [Papio anubis], gi|162951916|ref|NP_001106114.1| alpha-d...
138.0 [0..1] [94..1]
DFA14_MOUSE - Alpha-defensin 14 (Fragment) OS=Mus musculus GN=Defa14 PE=2 SV=2
134.0 [0..9] [94..1]

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Predicted Domain #1
Region A:
Residues: [1-57]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTLTLLTAL LLLALHTQAK SPQGTAEEAP DQEQLVMEDQ DISISFGGDK GTALQDA

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 30.69897
Match: PF00879.9
Description: No description for PF00879.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [58-94]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DVKAGVTCYC RSTRCGFRER LSGACGYRGR IYRLCCR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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