YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|23306796, gi\|...
Organism:	Rattus norvegicus
Length:	76 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|23306796, gi|....

Description	E-value	Query Range	Subject Range
IPKG_PIG - cAMP-dependent protein kinase inhibitor gamma OS=Sus scrofa GN=PKIG PE=3 SV=1	112.0	[0..1]	[76..1]
gi\|73992487 - gi\|73992487\|ref\|XP_853601.1\| PREDICTED: similar to cAMP-dependent protein kinase inhibitor gamma [Ca...	110.0	[0..1]	[76..1]
CCDS13334.1_1 - null PKIG - protein kinase (cAMP-dependent, catalytic) inhibitor gamma	109.0	[0..1]	[76..1]
gi\|90076928 - gi\|90076928\|dbj\|BAE88144.1\| unnamed protein product [Macaca fascicularis] gi\|109091867, gi... - gi\|109091873\|ref\|XP_001110061.1\| PREDICTED: similar to cAMP-dependent protein kinase inhibitor gamma...	107.0	[0..1]	[76..1]
gi\|111307175 - gi\|111307175\|gb\|AAI20317.1\| PKIG protein [Bos taurus]	105.0	[0..1]	[76..1]
gi\|82916369, gi\|... - gi\|94384555\|ref\|XP_981782.1\| PREDICTED: similar to cAMP-dependent protein kinase inhibitor gamma [Mu...	97.0	[0..1]	[76..1]
gi\|109479223, gi... - gi\|109479223\|ref\|XP_001075390.1\| PREDICTED: similar to cAMP-dependent protein kinase inhibitor gamma...	89.0	[0..1]	[67..1]

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Predicted Domain #1

Region A:
Residues: [1-76]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMEVESSYSD FISCDRTGRR NAVPDIQGDS EAVSVRKLAG DMGELALEGA EGQAEGSTPD  60
   61 KEASSQPESS DANTSS

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	42.69897
Match:	PF02827.7
Description:	No description for PF02827.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits