| Protein: | NPFF_RAT |
| Organism: | Rattus norvegicus |
| Length: | 114 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NPFF_RAT.
| Description | E-value | Query Range |
Subject Range |
|
|
167.0 | [0..1] | [114..1] |
|
|
145.0 | [0..1] | [114..1] |
|
|
136.0 | [0..1] | [114..1] |
|
|
135.0 | [0..1] | [114..1] |
|
|
130.0 | [0..17] | [114..18] |
|
|
126.0 | [0..5] | [114..6] |
|
Region A: Residues: [1-114] |
1 11 21 31 41 51
| | | | | |
1 MDSKWAAVLL LLLLLRNWGH AEEAGSWGED QVFAEEDKGP HPSQYAHTPD RIQTPGSLMR 60
61 VLLQAMERPR RNPAFLFQPQ RFGRNAWGPW SKEQLSPQAR EFWSLAAPQR FGKK
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.288 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.257 | a.162.1 | Pre-protein croslinking domain of SecA |
| View | Download | 0.239 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.239 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.207 | a.24.26 | Description not found. |
| View | Download | 0.202 | a.26.1 | 4-helical cytokines |
