YRC Public Data Repository - Protein Structure Prediction

Protein:	ATOX1_RAT
Organism:	Rattus norvegicus
Length:	68 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATOX1_RAT.

Description	E-value	Query Range	Subject Range
gi\|22003413 - gi\|22003413\|gb\|AAM88668.1\|AF390440_4 copper transporter [Pseudomonas putida]	89.0	[0..2]	[68..71]
gi\|115421723, gi... - gi\|187477137\|ref\|YP_785161.1\| copper-transporting P-type ATPase [Bordetella avium 197N], gi\|11542172...	87.0	[0..4]	[67..61]
gi\|77380892, gi\|... - gi\|77456889\|ref\|YP_346394.1\| copper-translocating P-type ATPase [Pseudomonas fluorescens Pf0-1], gi\|...	87.0	[0..2]	[68..71]
gi\|108800912, gi... - gi\|108800912\|ref\|YP_641109.1\| heavy metal translocating P-type ATPase [Mycobacterium sp. MCS], gi\|10... gi\|92917012, gi\|... - gi\|92917012\|ref\|ZP_01285628.1\| ATPase, E1-E2 type:Copper-translocating P-type ATPase:Heavy metal tra... gi\|92910547, gi\|... - gi\|92910547\|ref\|ZP_01279322.1\| ATPase, E1-E2 type:Copper-translocating P-type ATPase:Heavy metal tra...	86.0	[0..1]	[64..1]
gi\|89343006, gi\|... - gi\|89343006\|ref\|ZP_01195236.1\| ATPase, E1-E2 type:Copper-translocating P-type ATPase:Heavy metal tra...	86.0	[0..1]	[67..1]
gi\|120405401, gi... - gi\|90205999\|ref\|ZP_01208636.1\| ATPase, E1-E2 type:Copper-translocating P-type ATPase:Heavy metal tra...	85.0	[0..1]	[64..1]
gi\|37527684, gi\|... - gi\|37527684\|ref\|NP_931028.1\| copper exporting ATPase [Photorhabdus luminescens subsp. laumondii TTO1...	85.0	[0..9]	[68..184]
gi\|111020526, gi... - gi\|111020526\|ref\|YP_703498.1\| cation transport ATPase [Rhodococcus jostii RHA1], gi\|110820056\|gb\|ABG...	85.0	[0..2]	[68..13]
gi\|16418854, gi\|... - gi\|16763733\|ref\|NP_459348.1\| putative cation transport ATPase [Salmonella typhimurium LT2], gi\|16418... gi\|205329472, gi... - gi\|205329472\|gb\|EDZ16236.1\| copper-translocating P-type ATPase [Salmonella enterica subsp. enterica ... lcl\|NC_016856.1_... - [gene=STM14_0412] [protein=putative cation transport ATPase] [protein_id=YP_005236028.1] [location=3...	85.0	[0..6]	[67..14]
gi\|82719896, gi\|... - gi\|82742749\|ref\|ZP_00905430.1\| ATPase, E1-E2 type:Copper ion-binding:Copper-translocating P-type ATP...	84.0	[0..2]	[68..81]

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Predicted Domain #1

Region A:
Residues: [1-68]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKHEFSVDM TCGGCAEAVS RVLNKLGGVE FNIDLPNKKV CIESEHSSDI LLATLNKTGK  60
   61 AVSYLGPK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	14.69897
Match:	1fe0A
Description:	ATX1 metallochaperone protein (ATOX1)
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits