| Protein: | NPB_RAT |
| Organism: | Rattus norvegicus |
| Length: | 119 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NPB_RAT.
| Description | E-value | Query Range |
Subject Range |
|
|
183.0 | [0..6] | [119..8] |
|
|
173.0 | [0..1] | [118..1] |
|
|
163.0 | [0..7] | [116..9] |
|
|
160.0 | [0..17] | [117..20] |
|
|
153.0 | [0..17] | [118..20] |
|
|
153.0 | [0..17] | [119..20] |
|
|
88.0 | [0..66] | [119..5] |
|
Region A: Residues: [1-119] |
1 11 21 31 41 51
| | | | | |
1 MVRCRTLVAA ALALLLTPAL AWYKPAAGSH HYSVGRAAGL LSSFHRFPST RRSESPALRV 60
61 GTVPLRNLEM RPSVRSLALC VKDVTPNLQS CQRQLNSRGT FQCKADVFLS LHKAECQSA
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.835 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.556 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.556 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.530 | a.138.1 | Multiheme cytochromes |
| View | Download | 0.416 | a.74.1 | Cyclin-like |
| View | Download | 0.414 | b.7.1 | C2 domain (Calcium/lipid-binding domain, CaLB) |
| View | Download | 0.414 | b.7.1 | C2 domain (Calcium/lipid-binding domain, CaLB) |
| View | Download | 0.397 | a.253.1 | Description not found. |
| View | Download | 0.388 | a.1.1 | Globin-like |
| View | Download | 0.345 | d.110.4 | SNARE-like |
